Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00635 ATGGCCTCTAACTTCACCTTCTCGACTTTCATGATATTTGCCCTTGCATTTTCTCTCACCCTGCAAGCCACTCTTGGTGAGATAGAATGCGAGAATCTGAGCCACGAGACGTGCTCGTTCGCTGTGTCATCTGCTGGGAAACGGTGTGTGCTGGAGAAGCGCGTGAAGAGGAGTGGTGAGGAGGCATACACGTGCAAGACATCAGAGATTGAAGCTGAGAATGTGAAGGATCACATCGAAACAGAGCAATGCGTAAAGGCTTGTGGATTGGACAGAAAATCCCTTGGAATCTCATCAGATTCTCTTCTCGAGTCTACCTTCACACACAAGCTCTGTTCCCCTCACTGCTACCAAAGCTGCCCCAACGTTGTTGACTTATACTTCAATCTTGCAGCCGGTGAAGGTGTGTTTCTTCCCAAGTTGTGCGAGGTACAAGGTCTGAATGCTCGTCGAGGAATGGCTGAACTCAGAAGCTCTGGCATTGTGGCACCAGGACCTGTGCACTCTCTGCAGTTCGGTAGTATTGAACCTGCGGTTTCCCCATCATCAAACTAA 555 0.4937 MASNFTFSTFMIFALAFSLTLQATLGEIECENLSHETCSFAVSSAGKRCVLEKRVKRSGEEAYTCKTSEIEAENVKDHIETEQCVKACGLDRKSLGISSDSLLESTFTHKLCSPHCYQSCPNVVDLYFNLAAGEGVFLPKLCEVQGLNARRGMAELRSSGIVAPGPVHSLQFGSIEPAVSPSSN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00635 184 PANTHER PAR1 PROTEIN 8 181 IPR009489 -
Vian3g00635 184 Pfam PAR1 protein 28 181 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00635 Vian-Chr3 6397549 6398282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00635 - - gmx:100787709 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00635 3 6397549 6398282 Vian3g00635 3 6397549 6398282 ECH
Vian8g01067 8 28175724 28176865 Vian3g00635 3 6397549 6398282 PCT