Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01065 ATGCCGTGCTCTTCATCCACTTCCACCATCACCGGCGATAACAGCAGTAACAAGAATAGAGATGGTTCTTCCTCTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTCCTAGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCCATCTTCGATTCTGGTGTAGACCCAGCTGCTGATGGATTACAGACTACCTCAGATGGCAAGCCAAAAGTTCTCGATGTCATTGATTGTGGTGATACTGATACCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCATATTGGTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCATGTGGGCTATAAATTGGTTTATGAGCTATTCACGGACTCTTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAACTTGCTGACTTTGATCAGGTAGAGGATGTACTTCTTAAAAGGGCCCGGGAAGATATCCAGAATAGACTTGATATTCTGAGAAAGCAATCTGAGGACATTCATAAGTGGTGGAATGAGGATGATACAATGATTGTTACTAGCTATGATGATAGAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATAGTGGAAAGCTTGTTGATTTTGTGCCTTTAACTAATTATAGGATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACTTTTGTTGTTAATGTCTATAATGATGGGAATGTTTTGAGTATCGTAACAGACAGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCCTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTAACTCGCGCACTGATAGCTGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTATGGGCGCTTTGTTGACCTTGTGAATGAAGTTGTGAACAAGCATCGTTTGATATTTGTGAGCAGTGCTGGTAACAGTGGACCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACTTCCTCAAGTATCATAGGTGTTGGCGCGTATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAGCCTCCTTCTGATGGGCTTGAATACACTTGGTCTAGTAGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCGGGTGGTGCTGTTGCTCCTGTTCCCACTTGGACTCTGCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCTTCAGCCTGTGGAGGAATTGCTTTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGGATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATTCACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGTTAAATCCTTCATCAAGGGGCATCTACCTAAGGGAGGCTAGTGCTTGCATGCAATCTACCGAGTGGACAGTGCAAGTTAATCCAAATTTTCATGAAGATGCTGACAACTTAAACGATTTGGTTCCATTTGAGGAGTACATTGAATTGCATTCTACAGAAGAAACAGTTGTGAAGTCCCCTGACTATCTTTTACTCACTCATAATGGTCGCACCTTCAATGTAGTGGTCGATCCTTCCAATCTTTCTGATGGTCTTCATTATTTTGAGGTCTATGGTATTGACTACAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATCACGATAACAAAGCCTAAGGCTGTAACTAACCTGCCTCCACAAATTTCTTTTTCAAAGATGTTATTCCAGCCAGGTCATATAGAAAGAAGATACATCGAAGTGCCGCATGGTGCAACTTGGGCTGAAGCAACAATGAAAACATCAGATTTCGACACAGCAAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGAGTGCTGTAACTTTTCCTTCTCCTGCTGCGAAAAGCTTTGCGTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATCAGGATGTTATCCTTGATGGTAGTGATGCACCAGTTAGGATTGACACTGAAACACTACTGGTATCTGAGGAACTTGCACCTGTGGCAATTCTGAACAAGATTAGGCTGCCATATCGACCAGTAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGACAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACGTACCATTGTTAAATGACCGGATATATGACACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCAAACAAGCGTATATATTCAAGTGGAGATGTCTATCCAAGTTCTTCTAATCTTCCCAAAGGAGAGTATACTTTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCACTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTAATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGATGGGGAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAAGGGCTGTATATTGGTCCACCACAAAAAGAAAAACTTCCCAAGAATTCTCCACCCGGATCTGTATTGCTAGGGACAATTTCATATGGGAAGCTATCATTTGCTGGTCAGGGAGAAAATACAAATCCTGAAAAGCACCCTGCTTCATATACAATTTCTTATATAGTTCCCCCAAATAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGAATGTTACAGAACGCTTAAACGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCTTAAAACAAGAAACTTGTGAAGAGCGCTCGGAGTGGAAAGAGCTATCTGCCTTGCTCAAATCAGAATATCCAAAGTACACACCATTACTTGCAACCATTTTGGAAGGTCTAGTTTCTAGGACTAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTGGTGCTGCCAATGAGGTGATTGACAGTATTGACAGAGAAGAGCTGGCAAAATTTTTTGCACTAAAAAATGATCCTGAAGAGGAAGAAGCAGAGAATATCAGAAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCACTGGCAGAGATTGAGTCTTTAAAGGACGGAGATAAGTCCCCAACTTCGGCTGCAACAGAGGGGGCAAAAGGAGGCTTGGACAAAAAACAATCTACAGATGATCGCAGAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATCCTCTTAGTAACACGAGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAAAAGAAATTCTACGATCTGAAACTGTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTACATACGAGAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTTTTCTAG 3915 0.4301 MPCSSSTSTITGDNSSNKNRDGSSSLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGALIAIFDSGVDPAADGLQTTSDGKPKVLDVIDCGDTDTSKVVKADADGHIGGASGASLVINTSWKNPSGEWHVGYKLVYELFTDSLTSRLKKERKKKWDEKNQEEIAKAVKQLADFDQVEDVLLKRAREDIQNRLDILRKQSEDIHKWWNEDDTMIVTSYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLVDFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSIVTDSSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGIALVISAMKAEGIPVSPYSVRIALENTAVPIGDSPEDKLSTGQGLMQVDKLNPSSRGIYLREASACMQSTEWTVQVNPNFHEDADNLNDLVPFEEYIELHSTEETVVKSPDYLLLTHNGRTFNVVVDPSNLSDGLHYFEVYGIDYKAPWRGPLFRIPITITKPKAVTNLPPQISFSKMLFQPGHIERRYIEVPHGATWAEATMKTSDFDTARRFYVDAVQLCPLQRPLKWESAVTFPSPAAKSFAFRVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQDVILDGSDAPVRIDTETLLVSEELAPVAILNKIRLPYRPVDSKISALSTDRDKLPSGQQILALTLTYKIKLEDGAQIKPHVPLLNDRIYDTKFESQFYMISDSNKRIYSSGDVYPSSSNLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGLYIGPPQKEKLPKNSPPGSVLLGTISYGKLSFAGQGENTNPEKHPASYTISYIVPPNKIDEDKGKGSSLSSKKNVTERLNEEVRDTKIKVLASLKQETCEERSEWKELSALLKSEYPKYTPLLATILEGLVSRTNVKDKINHDEEVIGAANEVIDSIDREELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKDGDKSPTSAATEGAKGGLDKKQSTDDRRDLFEENFKELKKWVDVKSAKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLATYERQWMHVRFPPSLPLF 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01065 1304 Gene3D Peptidase S8/S53 domain 228 548 IPR036852 GO:0004252|GO:0006508
Vian8g01065 1304 PANTHER PEPTIDASE S8 37 925 - -
Vian8g01065 1304 ProSitePatterns Serine proteases, subtilase family, serine active site. 488 498 IPR023828 -
Vian8g01065 1304 Gene3D - 549 670 IPR046940 -
Vian8g01065 1304 SUPERFAMILY Subtilisin-like 40 557 IPR036852 GO:0004252|GO:0006508
Vian8g01065 1304 MobiDBLite consensus disorder prediction 1185 1209 - -
Vian8g01065 1304 ProSiteProfiles Serine proteases, subtilase domain profile. 45 551 - -
Vian8g01065 1304 FunFam Tripeptidyl-peptidase 2 1048 1304 - -
Vian8g01065 1304 Pfam Subtilase family 60 530 IPR000209 GO:0006508|GO:0008236
Vian8g01065 1304 Pfam Tripeptidyl peptidase II 805 989 IPR022229 -
Vian8g01065 1304 PRINTS Subtilisin serine protease family (S8) signature 487 503 IPR015500 -
Vian8g01065 1304 PRINTS Subtilisin serine protease family (S8) signature 60 79 IPR015500 -
Vian8g01065 1304 PRINTS Subtilisin serine protease family (S8) signature 300 313 IPR015500 -
Vian8g01065 1304 Coils Coil 1149 1169 - -
Vian8g01065 1304 FunFam Tripeptidyl-peptidase 2 101 162 - -
Vian8g01065 1304 FunFam Tripeptidyl-peptidase 2 homolog 228 553 - -
Vian8g01065 1304 Gene3D - 101 166 - -
Vian8g01065 1304 Gene3D - 1048 1304 IPR046939 -
Vian8g01065 1304 FunFam Tripeptidyl-peptidase 2 542 670 - -
Vian8g01065 1304 MobiDBLite consensus disorder prediction 1 25 - -
Vian8g01065 1304 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 40 530 IPR034051 GO:0006508|GO:0008240
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01065 Vian-Chr8 28061759 28081722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01065 K01280 - gmx:100798235 2287.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01065 8 28061759 28081722 Vian8g01065 8 28061759 28081722 ECH
Vian8g01065 8 28061759 28081722 Vian3g00639 3 6466085 6486047 PCT