Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00639 ATGCATAACCAACGCACACTCTTACTCAGACTCCCCTCGTTGCCCTCTCACTCTCTCACCACCACTCATCACCCCACAACAAACACAAAGGTAAGCAGAACGATAAGGAAACGCAATCGCAGTTCCTCCTTCAGAAGAAGCAATTGGGTTGTCCCCAATGCATTGACAATGCATTGTACTTCTCGCTCTGGCAGCGATGATAACAACAACCACAACGGTGCCACTTTCCGCAACGCCAAGCTGAACGAGTCAACCTTCCTGGCTTCTCTCATGCCCAAGACGGAGATTGGCGCTGATCGTTTCCTTAATGCTCACCCACATTACGACGGGCGCGGTGCTCTCATTGCTATCTTCGATTCTGGTGTAGACCCGGCTGCAGCTGGATTACAGGTGACCTCAGATGGGAAACCAAAAATCGTCGATATTCTTGATTGCACTGGGAGCGGAGACGTTGATACCTCAAAGGTGGTCAAGGCTGATGCGGATGGTTGTATTTTGGGGGCTTCTGGGGCATCTTTGGTCATCAATACTGCCTGGAAAAATCCCTCTGGTGACTGGCATGTGGGTTATAAATTGGTTTATGAGCTTTTTACAGAAAATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAAAAACCAGGAGGAAATTGCAAAGGCTATAAAGCAGCTTACTGATTTTGATCAGGAAAACGTGAAGGTGGAGGAAGCTAATCTTAAAAGGGTTCGTGAAGACATTCAGAATAAACTTGATCTTCTGAGGAAGCAGTCTGAGAGTTATGATGATAAAGGGCCTGCCATAGATGCTGTTGTCTGGTTTGATGGAGAGGTTTGGAGGGTTGCAATTGACACACAGAGTCTTGAGGAAGATCCAGACTGTGGGAAACTTGCTAATTTTGTACCCTTAACTAATTATAGGACTGAGAAGAAGTATGGTATCTTCAGCAAATTAGATGCTTGTACATATGTTGTGAATGTCTATAATGATGGAAATGTCTTAAGCATGGTAACAGATAGCTCCCCTCATGGCACCCATGTTGCTGGTATAGCTGCTGCATTCCACCCAGAGGAACCTTTATTGAATGGAGTTGCACCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTCTGACTAGGGCTCTGATAGCTGCTGTTGAGCATAAATGTGATCTTATCAATATGAGTTATGGTGAGCCTACTTCACTGCCAGACTATGGACGGTTCGTTGACCTTGTGAATGAAGCAGTAAACAAGCATCGACTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCGGCATTGAGCACTGTTGGAGCACCTGGTGGTACATCTTCAAATATTATAGGTGTTGGAGCTTATGTTTCTCCTGCAATGGCAGCTGGTGCTCATTCTGTTGTTGCACCTCCTTCCGATGGGCTTGAATACACATGGTCTAGCCGTGGACCAACAACTGATGGAGATCTTGGTGTCTCTGTAAGTGCTCCTGGTTGTGCAGTTGCACCTGTTCCTACATGGACTCTTCAAAGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGTGGAATTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGGATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAAAATACATCTCTTCCCATAGGTGGTTCACCTGAGGATAAGTTGTCCACTGGGCAAGGGCTTATGCAAGTTGACAATGGGGACATTGCTGTCCATATACTGTTCTTTATAGATCACAATGCTTGGTCACGGGGCATCTACTTGAGGGAGGCTAATGATTGCAGACAACCTATGGAGTGGACGGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAAGAAGCTTGAGGAATTGGCTATGTTTGAGGAGTTCATTGAATTGCGCTCATCAGATCAGACAGTTGTGAAAGCCCCCGAGTATCTTCTTCTCACTCATAATGGCCGTACCTTCAAGTTATCACCCTTTGCCACCACCACCTCTTTGTCGTCGCTGTTGTGCCCCCTTGCCATTGCTGCCCTTGCCTCACTGTACCCTGGTCTATTACAAAATGAAATCCCCGTATTTGTATCTTCCCAGATAGCAAGGCTCAATGACCTAGATAAGCTTTTTCAGCTAGCTTCTAATTATCTTACAGCTGCAGCACTACTAACAGTGACAGATGAATTATACTCTTGTTTCAGCATAATTGTGGATCCTACCAATTTAAATGATGGTCTGCATTACTATGAGCTTTATGGTATTGACTACAAAGCACCATGGCGTGGTCCTATTTTCAGAATTCCAATTACTGTAACCAAGCCCATGGCTGTAACTGACAGAAATCCTCTAGTTTCATTTTCAAATATGTTATTCCTGCCAGGCCATGTCGAGAGGAAGTATATAGAAGTGCCAAATGGTGCATCTTGGATTGAAGCAACTATGAATGCATCAAGTTTTGATACAGTTCGAAGATTTTTTGTGCACACAGTTCAGATATGTCCATTGCGAAGACCTATTGCACGGAGGAATGTGATAACTTTTTCCTCTCCTGCTGCCAAAAGCTTTACCTTTAGCGTAGTAGGTGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGCATTGGCAGTCATGAGACCACCAGGGTGGATCTTGAGGTTATGTTTCATGGTATAAAAGTCAATCAAGAGGAAATTGTACTTGATGGGAGTGAAGCACCAATCAGAATTGATGCTGAAGCGCTATTGGCAGCTGAGAAACTTGCACCAGTAGGAATTCTGAATAAGATAAGGGTGCCCTATCGACCAATAGATGCTACAATTAGCTCACTTTCAAGTGATCGTGACAAACTCTCCTCTGGAAAGCAGATACTAGCATTGACGTTAACATACAAGATCAAATTGGAAGATGGAGCTGAAATAAAACCTCAAATACCGTTTCTAAATGATCGGATATATGATACTAAATTTGAATCTCAATTTTATATCATTTCCGATTCAAACAAGATTTTGGAAAAGATGAAGCAGCTGGTGTTATTCATCCAGCGGAATTTAGAAGAGAAGGAGATCATTCGCTTATGCTTTTTCTCTGAACCTGATGGTCCAGTGATGGGAGATAGCTCCTTTAAGTCCTCAACGTTAGTTCCAGGTATAAAAGAAGGATTTTATCTTGGTCCTCCACCAAAAGACAAACTTCCGAAGAACTGTCTACAAGGATCTGTGTTGGTGGGATCAATATCATATGGTAAACTATCATTTGCTGGTCTACAGGATGGTAAAAGTCCAGAAAAGCATCCTGTGTCACATCGGGTTGACGAAGACACGGGAAAAAGTTCTTCCTTATCTTCCAAAAAGACAGTTTCTGAACGCTTAGAACAAGAGATAATTGATGCAGCAAATGAGGTTATTGACAGTGTTGATAAACAAGAGTTAGCAAAATTTTTAGCACTAAAACATGATCCAGGAGATGAGGAAGTAGAGAAAACCAAGAAAGAGATGGACTTAGCCCGTGATCAGTTGGCAGAAGCACTTTACCAAAAGGGGCTTGCACTGGCAGAGATTGCGTCTTTAAAGGTAGATGAGCAATCAAAGGATGATGACGTTCATCCAGACTTGTTCAAAGAGAACTTCAATGAACTGAAGAAATTGGTTGATGTCAAGTGCAGAAAATATGGAATCCTGTTGGTCACAAACGAGAGGCGTAATCAAAGGCTTGGGACAGCATTAAAGGTAGTGAATGACATCATTGAAGATGATGCCGAGCCTGCTCCGAAGAAATTCTATGATCTAAAGCTCTCTTTGCTTGAGGAAATTGGATGGACTCATTTTTGTTCATATGAGAGGGAATGGATGCTTGTGCGTTTCCCCCCAAGCTTGCCCCTTTTCTAG 3948 0.4334 MHNQRTLLLRLPSLPSHSLTTTHHPTTNTKVSRTIRKRNRSSSFRRSNWVVPNALTMHCTSRSGSDDNNNHNGATFRNAKLNESTFLASLMPKTEIGADRFLNAHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKIVDILDCTGSGDVDTSKVVKADADGCILGASGASLVINTAWKNPSGDWHVGYKLVYELFTENLTSRLKKERKKKWDEKNQEEIAKAIKQLTDFDQENVKVEEANLKRVREDIQNKLDLLRKQSESYDDKGPAIDAVVWFDGEVWRVAIDTQSLEEDPDCGKLANFVPLTNYRTEKKYGIFSKLDACTYVVNVYNDGNVLSMVTDSSPHGTHVAGIAAAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSNIIGVGAYVSPAMAAGAHSVVAPPSDGLEYTWSSRGPTTDGDLGVSVSAPGCAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYSVRKALENTSLPIGGSPEDKLSTGQGLMQVDNGDIAVHILFFIDHNAWSRGIYLREANDCRQPMEWTVQVDPKFHEDAKKLEELAMFEEFIELRSSDQTVVKAPEYLLLTHNGRTFKLSPFATTTSLSSLLCPLAIAALASLYPGLLQNEIPVFVSSQIARLNDLDKLFQLASNYLTAAALLTVTDELYSCFSIIVDPTNLNDGLHYYELYGIDYKAPWRGPIFRIPITVTKPMAVTDRNPLVSFSNMLFLPGHVERKYIEVPNGASWIEATMNASSFDTVRRFFVHTVQICPLRRPIARRNVITFSSPAAKSFTFSVVGGQTLELVIAQFWSSGIGSHETTRVDLEVMFHGIKVNQEEIVLDGSEAPIRIDAEALLAAEKLAPVGILNKIRVPYRPIDATISSLSSDRDKLSSGKQILALTLTYKIKLEDGAEIKPQIPFLNDRIYDTKFESQFYIISDSNKILEKMKQLVLFIQRNLEEKEIIRLCFFSEPDGPVMGDSSFKSSTLVPGIKEGFYLGPPPKDKLPKNCLQGSVLVGSISYGKLSFAGLQDGKSPEKHPVSHRVDEDTGKSSSLSSKKTVSERLEQEIIDAANEVIDSVDKQELAKFLALKHDPGDEEVEKTKKEMDLARDQLAEALYQKGLALAEIASLKVDEQSKDDDVHPDLFKENFNELKKLVDVKCRKYGILLVTNERRNQRLGTALKVVNDIIEDDAEPAPKKFYDLKLSLLEEIGWTHFCSYEREWMLVRFPPSLPLF 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00639 1315 Coils Coil 1179 1199 - -
Vian3g00639 1315 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 90 572 IPR034051 GO:0006508|GO:0008240
Vian3g00639 1315 Gene3D - 154 220 - -
Vian3g00639 1315 PANTHER PEPTIDASE S8 88 957 - -
Vian3g00639 1315 MobiDBLite consensus disorder prediction 13 29 - -
Vian3g00639 1315 FunFam Tripeptidyl-peptidase 2 homolog 270 594 - -
Vian3g00639 1315 ProSiteProfiles Serine proteases, subtilase domain profile. 95 593 - -
Vian3g00639 1315 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Vian3g00639 1315 ProSitePatterns Serine proteases, subtilase family, histidine active site. 346 356 IPR022398 -
Vian3g00639 1315 SUPERFAMILY Subtilisin-like 35 589 IPR036852 GO:0004252|GO:0006508
Vian3g00639 1315 Gene3D Peptidase S8/S53 domain 271 593 IPR036852 GO:0004252|GO:0006508
Vian3g00639 1315 PRINTS Subtilisin serine protease family (S8) signature 110 129 IPR015500 -
Vian3g00639 1315 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Vian3g00639 1315 PRINTS Subtilisin serine protease family (S8) signature 342 355 IPR015500 -
Vian3g00639 1315 MobiDBLite consensus disorder prediction 13 43 - -
Vian3g00639 1315 Pfam Subtilase family 110 583 IPR000209 GO:0006508|GO:0008236
Vian3g00639 1315 Gene3D - 1100 1315 IPR046939 -
Vian3g00639 1315 MobiDBLite consensus disorder prediction 1110 1139 - -
Vian3g00639 1315 FunFam tripeptidyl-peptidase 2 isoform X1 93 178 - -
Vian3g00639 1315 Pfam Tripeptidyl peptidase II 936 1022 IPR022229 -
Vian3g00639 1315 MobiDBLite consensus disorder prediction 1115 1132 - -
Vian3g00639 1315 Coils Coil 240 267 - -
Vian3g00639 1315 FunFam Tripeptidyl-peptidase 2 154 215 - -
Vian3g00639 1315 Gene3D - 600 696 IPR046940 -
Vian3g00639 1315 Gene3D - 710 803 IPR046940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00639 Vian-Chr3 6466085 6486047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00639 K01280 - gmx:100787184 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00639 3 6466085 6486047 Vian3g00639 3 6466085 6486047 ECH
Vian8g01065 8 28061759 28081722 Vian3g00639 3 6466085 6486047 PCT