Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01045 ATGGCACTGGCTCCCCCTCCAACAGTTGCCCTTGGTTCAGTAGCCTTTGCAGTCTTCTGGGTTCTAGCAGTTTTCCCATGTGTGCCTTTTCTACCTATTGGGAGAACGGCAGGGTCCCTACTGGGTGCAATGCTTATGGTCATATTCCAAGTTCTGACTCCAGATCAAGCTTTTGCTGCAATTGATATTCCAATTCTTGGTCTTCTTTTTGGCACAATGGTTGTTACTGTTTTTCTTGAAAGAGCAGACCTGTTCAAGTACTTGGGGAAGCTGCTCTCGTGGAAAAGTAGAGGACCAAAAGACTTACTTTGTAGAATCTGTGTGATTTCTGCTATTTCAAGTGCTTTTTTCACCAATGACACCTCTTGTGTTGTGCTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCATAACCTCCCACCTTACCCTTTCCTTCTTGCACTTGCTTCAAGTGCTAATATTGGCTCCTCAGCAACCCCAATTGGGAACCCCCAGAATCTGGTTATAGCTATTCAAGGCAAAATATCATTTGGGAGTTTTCTAACTGGCATTCTTCCAGCTATGCTTGTAGGACTTGTGGTGAATGTTTTAATGCTTATAGTCATATATTGGAGGGTGTTAACTATTCACAAGGATGAAGAGGATCCAATTTCACAAGTGGCAGAAGAGGAGATTATGTCTCATCAGTTTTCTCCAGCCATAATGGCTCATTGTGCATCCTTTAATTCTGAAGAATGCAGTGACAGTTCAGAACCAACTAATAATCTTCAGAACTCTTCTCAAGTTCACACTATGACAAACCAAAAAGTGCATAGTTTAAGTGAAGTTCAGATGGGTGTTAGTAGCAAAAACTCAAAGGATTCCACAACAACCTCAAATGCATCCAAGAAGGGGACCAGTGACACCAATCCTTCAAAAGATGTTGCAGTAGTAGTGGATAGACCTATAGAAGCACGTATTATGCACTCTTCACAAGGAAAGGAGGACTATTTGAGCTTAAAATGGAAAAGGATACTATGGAAATCTTGTGTTTATGCAATCACATTGATGATGTTGATTGCAATGCTTCTTGGTGTAAATATGGCATGGGCTGCAATTGCAGCTGCAATAATTTTGGTTGTGCTTGATTTCAAAGATGCAGGGCCTAGCATAGACAAGGTCTCTTATTCCCTTTTGATATTCTTCTGTGGAATGTTTATAACAGTAGATGGCTTCAAGAAAACTGGAATTCCAAGTGCTCTGTGGGACTTAATGGAGCCTTATTCCAGAATAGATCATGCTACTGGAATAGCTATACTTGCTGTAGTTATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACTGTTCTGTTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAGGCATGGCTAATCCTAGCTTGGGTGAGCACTATAGCAGGAAACTTTTCACTGTTAGGATCTGCTGCAAACTTGATTGTGTGTGAACAAGCTCGTAGAGCTCCAAACAATGGATACACATTAACTTTTTGGACTCATCTCAAATTTGGTCTTCCTTCAACTCTCATAGTCACTGCCATTGGATTAATCCTCATAAGATGA 1611 0.4109 MALAPPPTVALGSVAFAVFWVLAVFPCVPFLPIGRTAGSLLGAMLMVIFQVLTPDQAFAAIDIPILGLLFGTMVVTVFLERADLFKYLGKLLSWKSRGPKDLLCRICVISAISSAFFTNDTSCVVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGSFLTGILPAMLVGLVVNVLMLIVIYWRVLTIHKDEEDPISQVAEEEIMSHQFSPAIMAHCASFNSEECSDSSEPTNNLQNSSQVHTMTNQKVHSLSEVQMGVSSKNSKDSTTTSNASKKGTSDTNPSKDVAVVVDRPIEARIMHSSQGKEDYLSLKWKRILWKSCVYAITLMMLIAMLLGVNMAWAAIAAAIILVVLDFKDAGPSIDKVSYSLLIFFCGMFITVDGFKKTGIPSALWDLMEPYSRIDHATGIAILAVVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKKAWLILAWVSTIAGNFSLLGSAANLIVCEQARRAPNNGYTLTFWTHLKFGLPSTLIVTAIGLILIR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01045 536 PANTHER TRANSPORTER ARSB-RELATED 1 536 - -
Vian8g01045 536 MobiDBLite consensus disorder prediction 277 306 - -
Vian8g01045 536 MobiDBLite consensus disorder prediction 277 308 - -
Vian8g01045 536 Pfam Citrate transporter 27 483 IPR004680 GO:0016020|GO:0055085
Vian8g01045 536 CDD YbiR_permease 28 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01045 Vian-Chr8 27680951 27682839 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01045 - - gmx:100792256 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01045 8 27680951 27682839 Vian3g00654 3 6634448 6638353 PCT