Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01043 ATGGCATTGGCATCTGTTCCAAAACTAGTGCTTGGATCCATTGCCTTTGCAATCTTTTGGATGCTAGCAGTTTTTCCTGCTGTGCCATTCCTTCCCATTGGGAGAACTGCAGGGTCCTTGTTAGGTGCAATGCTCATGGTCATATTCCAAGTTCTCAGTCCAGATCAAGCATACGAAGCAATCGATCTTCCAATTCTCGGTCTTCTTTTCGGCACAATGGTAGTCAGTGTTTACCTAGAAAGAGCTGACATGTTTAAATACATAGGAAAATTGCTTTCATGGAAAAGTAAAGGAGCAAAGGACTTACTTTTTAGAATCTGTGTGATTTCTGCTGTCTCAAGTGCTCTTTTCACCAATGACACTGCCTGTGTTGTTCTGACTGAATTCATATTGAAAATTGCAAAGCAACACAACCTCCCACCACACCCTTTACTGCTTGCACTTGCTACAAGTGCTAATATTGGCTCTGCAGCAACTCCGATCGGCAACCCTCAAAATCTTGTCATAGCTGTTCAAGGTAAAATATCATTCGGACAGTTTCTGATTGGTGTTCTTCCAGCTATGCTTGTAGGGGTTGTAGTGAATGCTGTGATTCTTATGGTGATGTATTGGAGGGTGTTGTCTATTCAAAAGGATGAAGAAAATCCAATAGCAAATCATGCAGCAGAGGAAGAGGTTAATTCTCATCAGTTTTCTCCAGCCACAATGTCTCATTATAACTCACTCAACTCTGAACAATGGAATGCACACATGGAAAATATCAATCTTCCAAGTTCCCCTCATGGTCAGAATCTGAGAATTCGATCGGTAGTGGGTGATGGTGAAATCGACAGGGTTCTCAGTAACACGTTAGATTCCACAAGAAACTCGAATGCATCAAAGGAGGAGACAAATGGTATGACTTATGAGACACACGAGGAAACCAGTCCTTCAAAAACTGATGCCAAAATGGTTAAACCAGTTGTGGAAACTGTCTTGAACAGTTTAGAAGTAAAGGAGCGTTTGGGTGTAAGATGGAAATATATACTGTGGAAGTCTTGTGTTTACATGATCACATTGGGAATGTTGGTTGCCATGCTTTTTGGTTTGAATATGTCATGGACTGCTATTTCAGCTGCTCTAGCTTTGGTTGTTCTTGATTTCCAAGATGCTAGACCATCCTTAGAAAAGGTTTCTTATTCGTTGTTGATATTCTTTTGTGGAATGTTCATAACAGTAGATGGTTTCAATAAAACTGGAATTCCACGTGCTCTCTGGGAGGTCATGGAACCGTATTCTCGAGTAGATCGTGCCAGTGGAGTAGCAATGCTTGCTTTGGTTATACTCATCTTATCAAATGTGGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGGACCAGTTGCAGCCTCAGCTGCTGCAATTTCCGAAGAAAGTGAGAAGAAAGCATGGCTGATATTGGCTTGGGCGAGCACAGTTGCAGGAAACTTATCACTTCTGGGATCAGCTGCAAACTTGATAGTCTGTGAACAAGCTCGTCGTGCTCCTAACATTGCTTACACTTTAACTTTCTGGAACCATCTCAAATTCGGTCTTCCTTCAACCCTTATAATCACTGCCATTGGTTTGACACTCATAAGATGA 1623 0.4165 MALASVPKLVLGSIAFAIFWMLAVFPAVPFLPIGRTAGSLLGAMLMVIFQVLSPDQAYEAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSKGAKDLLFRICVISAVSSALFTNDTACVVLTEFILKIAKQHNLPPHPLLLALATSANIGSAATPIGNPQNLVIAVQGKISFGQFLIGVLPAMLVGVVVNAVILMVMYWRVLSIQKDEENPIANHAAEEEVNSHQFSPATMSHYNSLNSEQWNAHMENINLPSSPHGQNLRIRSVVGDGEIDRVLSNTLDSTRNSNASKEETNGMTYETHEETSPSKTDAKMVKPVVETVLNSLEVKERLGVRWKYILWKSCVYMITLGMLVAMLFGLNMSWTAISAALALVVLDFQDARPSLEKVSYSLLIFFCGMFITVDGFNKTGIPRALWEVMEPYSRVDRASGVAMLALVILILSNVASNVPTVLLLGGPVAASAAAISEESEKKAWLILAWASTVAGNLSLLGSAANLIVCEQARRAPNIAYTLTFWNHLKFGLPSTLIITAIGLTLIR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01043 540 MobiDBLite consensus disorder prediction 299 313 - -
Vian8g01043 540 MobiDBLite consensus disorder prediction 286 315 - -
Vian8g01043 540 CDD YbiR_permease 28 539 - -
Vian8g01043 540 Pfam Citrate transporter 27 487 IPR004680 GO:0016020|GO:0055085
Vian8g01043 540 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01043 Vian-Chr8 27597264 27601051 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01043 - - gmx:100818695 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01043 8 27597264 27601051 Vian3g00654 3 6634448 6638353 ECH
Vian8g01043 8 27597264 27601051 Vian8g01043 8 27597264 27601051 ECH
Vian3g00654 3 6634448 6638353 Vian8g01043 8 27597264 27601051 PCT