Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01042 ATGTTCAGCTCCAGTCCTGCCATGGGAAGCCGCAACAACACCACCCTGGAGACGGTCAGCGCTGCTGCCACAGCCATCGTCACCGCCGAATCCAGAGTCCAGCCGACCGCCGCGCCGACAAAACGTTGGGGAGGCTGCTGGAGCCAATATTGGTGCTTTGGATCTTGTAAAAGCAGTAAAAGCAGCAAGCGAATAGGCCATGCTGTCCTTGTTCCTGAACCTGTTGCACCAACAGGTCCAGCTGCTGCTGCTGCTGCTACTGCACCACCAAATCCTTCAACTGCCATTGTAATGCCCTTCATTGCCCCTCCATCTTCTCCTGCATCTTTAATCCAATCTGATCCCCCATCTGCTATTCAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCGGCCAATGCTTACTCTTCTGGTGGTCCAGCATCCATGTTCACCATTGGTCCATATGCCTATGAGACTCAACTAGTTTCTCCGCCCGTATTTTCCAACTTCACAACTGAACCATCCACTGCTCCTTTTACTCCCCCACCCGAATCTGTGCATCAAACAACACCTTCATCCCCGGACGTTCCATTTGCTCAATTGTTGGCATCTTCTCTGGACAGGGCTCGGAAAAATAGTGGGAATCAAAAGTTTGCATTATACAATTATGATTTTCAGCCTTACCAACAATATCCTGGAAGCCCAGGTGGCCAACTCATATCACCTGGCTCAGCATTTTCAACTTCTGGCACTTCTACCCCATTTCCTGATAGACCCCCTACTCTTGAGTTCCGCAAAGGGGAAACACCAAAGATCTTGGGTGTTGAACACTTCTCCACCCAAAGATGGAGTTCCAGACTAGGATCTGGATCATTAACACCAGATGGTGCCGGGCAAGGTTCAAGACTTGGCTCAGGATCCGTGACTCCTGATGGTGTTGGGCTGGCTTCACGGTTAGGTTCTGGGTGTGTGACACCTGATGGTCTGGGGCAGGAATCCAGATTAGGTTCTGGCTGCTTGACACCTGATGGTGCCGGGCCAACCAATCAAAACATCTCTGTGGAAAACCAGATTTCTAAGGAAGCAACTCTTGCTAACTCGGACAGTGGACATCCAAGTAATGCAACATTGGTTGATCACAGAGTTTCATTTGAATTAACTGGGGAAGACGTTGCTCGGTGTCTTGCTAATAAAACTGGGGTATTGCATCGAAATATGTCAGGGTCCTCTCAAGGTATACTGGCCAAAGACCCTGTTGACAGAGAAAGGGTGCAAAGAGACACCGATACTAGCTGTAATGTGTGTACAGAGAAAACAGATGACAAGCCATACAATCCTGTTGGAGAAGGAGAGCAATGTTTCCATAAGCAGAATTCTGTAAATTCTTCTAAAGAATTCAATTTTGACAGCAGTAAAGGAGTTGTTTCTGGTACCGGTGGCAGTGGCTCTGAGTGGTGGACTAACAGGAGGGTTGCCGGGAGGGAAGGTAGATCAGCCAACAGCTGGGCTTTCTTCCCAATGTTACAGTCAGAAATGAACTAA 1527 0.4872 MFSSSPAMGSRNNTTLETVSAAATAIVTAESRVQPTAAPTKRWGGCWSQYWCFGSCKSSKSSKRIGHAVLVPEPVAPTGPAAAAAATAPPNPSTAIVMPFIAPPSSPASLIQSDPPSAIQSPPGLLSLSSLAANAYSSGGPASMFTIGPYAYETQLVSPPVFSNFTTEPSTAPFTPPPESVHQTTPSSPDVPFAQLLASSLDRARKNSGNQKFALYNYDFQPYQQYPGSPGGQLISPGSAFSTSGTSTPFPDRPPTLEFRKGETPKILGVEHFSTQRWSSRLGSGSLTPDGAGQGSRLGSGSVTPDGVGLASRLGSGCVTPDGLGQESRLGSGCLTPDGAGPTNQNISVENQISKEATLANSDSGHPSNATLVDHRVSFELTGEDVARCLANKTGVLHRNMSGSSQGILAKDPVDRERVQRDTDTSCNVCTEKTDDKPYNPVGEGEQCFHKQNSVNSSKEFNFDSSKGVVSGTGGSGSEWWTNRRVAGREGRSANSWAFFPMLQSEMN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01042 508 MobiDBLite consensus disorder prediction 167 192 - -
Vian8g01042 508 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 13 507 IPR040420 -
Vian8g01042 508 MobiDBLite consensus disorder prediction 237 260 - -
Vian8g01042 508 MobiDBLite consensus disorder prediction 279 307 - -
Vian8g01042 508 MobiDBLite consensus disorder prediction 237 251 - -
Vian8g01042 508 MobiDBLite consensus disorder prediction 279 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01042 Vian-Chr8 27526633 27530857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01042 - - gmx:100806399 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01042 8 27526633 27530857 Vian3g00655 3 6647390 6650639 ECH
Vian8g01042 8 27526633 27530857 Vian8g01042 8 27526633 27530857 ECH
Vian8g01042 8 27526633 27530857 Vian3g00655 3 6647390 6650639 PCT