Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00655 ATGGGAACAGTTAACAACACAGTCAATGCTGCGGCTTCGGCGATAGTAGTTGCCGAATCCAGAATCCAACCTGCCAGCTCGCCGAAAAAGCGCTGGGGAAGCTGCTGGAGCTTATATTGGTGTTTTGGACCCCATAAAAACAACAAGAGAATTGGCAACGCTGTCCTCGTTCCTGAACCTGTTGAACCAGTGGGTCAAGTTGGATCTCATCCTGCTACTGCTGCACCAAATCCTTCAACAGCCGTTGTGATGCCATTCGTTGTCCCTCCCTCTTCACCTGCGTCTTTTCTGGAATCCGATCCTCCATCTGCCACTCAATCACCGGTTGGATTATTCTCTCTCAGTTCTCTCAATGTCAATGCTTCTGGTGGACCTGCATCCATTTTTGCTATAGGTCCTTATACCTACGAGACCCAGTTAGTCTCACCGCCTGTATTTTCTAACTTTACCACTGAACCATCTACTGCTCCTTTCACTCCACCTCCTGAATCGGTGCAGCTGACGACACCATCATCCCCTGAGGTGCCATTTGCTCAATTATTGGAATCTTCTCTAGATCAAGATTGTAAAAATAAAGGTACAAATCAAAGATTTGCATTATCCAATTATGAGTTTCAACTTTATCAACAATACCCCGGAAGTCCTGGCACCCAACTTATATCACCTGGATCAATCATTTCTACTTCTGGAAGCTCTACTCCTTTCCCTGATAGACACCCACTTCTTGAATTCCACAAAGGAGAAGCATCAAACCTCTTGGGCTTTGAACACTTCTCGACACATAAATGGAATTCCAGACTTGGATCAGGATCTTTGACACCAGACAGTACTGGGCAAGGTTCAGGACTAGGCTCAGGATCTTTGACACCTAATGTTGTTAAGCCAGCTTCACAACTAGGCTCTGGGTGTTTGACACCTGATGGTGCAGCACCAACTGCTGCAAAAGACATCTATGTTGGAAAACCGATTTCTGAGTTAACATCCCTTGCAAATTCCAAGGACGAGGGTCAACCCAATGCAGCATTAGTTGATCACAGAGTTTCATTTGAATTGACTGGGGAAGATGTGGCACGATGTCTTCCAAATAAATCAGGGTCTCCTTTGATTGGAAACATCTCAGGGTCTTCTGAGGATGCACTGCTTGGAGAGCCTGTTGACAGAGAAAGTATACACTGTGATTTGTGTTCAAGGAAAACTTCAAATGATAAGCCTGAAAATTCTCCTAGAGAAGGAGAAGAGCATTGCAATTCTTCCAAAGAATTTAACTTTGACAGCAGAAAAGGTGTTGTTTCTGATAATCCTGCCAATGCCTCGGAATGGTGGACTAACAAGAAAATGGTTGGAAAGGAAAGTAGATCAAGCAACGTTCCGGCATTTTTCCCAATGTTACAGTCAGAAGTCGTTTAA 1407 0.4449 MGTVNNTVNAAASAIVVAESRIQPASSPKKRWGSCWSLYWCFGPHKNNKRIGNAVLVPEPVEPVGQVGSHPATAAPNPSTAVVMPFVVPPSSPASFLESDPPSATQSPVGLFSLSSLNVNASGGPASIFAIGPYTYETQLVSPPVFSNFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLESSLDQDCKNKGTNQRFALSNYEFQLYQQYPGSPGTQLISPGSIISTSGSSTPFPDRHPLLEFHKGEASNLLGFEHFSTHKWNSRLGSGSLTPDSTGQGSGLGSGSLTPNVVKPASQLGSGCLTPDGAAPTAAKDIYVGKPISELTSLANSKDEGQPNAALVDHRVSFELTGEDVARCLPNKSGSPLIGNISGSSEDALLGEPVDRESIHCDLCSRKTSNDKPENSPREGEEHCNSSKEFNFDSRKGVVSDNPANASEWWTNKKMVGKESRSSNVPAFFPMLQSEVV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00655 468 MobiDBLite consensus disorder prediction 396 435 - -
Vian3g00655 468 MobiDBLite consensus disorder prediction 152 172 - -
Vian3g00655 468 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 5 467 IPR040420 -
Vian3g00655 468 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00655 Vian-Chr3 6647390 6650639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00655 - - ccaj:109793217 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01042 8 27526633 27530857 Vian3g00655 3 6647390 6650639 ECH
Vian3g00655 3 6647390 6650639 Vian3g00655 3 6647390 6650639 ECH
Vian8g01042 8 27526633 27530857 Vian3g00655 3 6647390 6650639 PCT