Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00881 ATGGACCTGGAATTGGGACTCAAAATCACCAAAACTAGAGATGACATTGCTTCCATCTCTGAATATCGATTAGCAAAAGCAGGACCTGTTTTTCAATCTAGAGAAACAAACACTGCTTTCATCCTCACTGCTCATCTCAAAGGTTTTAAGAAGAATAACATTAACATCAAGATTAGTGAAGATGGTAACAAGATATCAGTTAGTGGAGAGAAGCCTGTTCAGAATATTTTGATGATGGGATGGTTAATGCATAGGAAAGAGGTTGATGTTGCAGGGTTTAATAAGGTTTTCAGAATTCCTGATGGCGTGAAATTGGATGGGATCAAGGCCAAGTATGATGAGGACGAATGGATAATGAACATTATCATGCCAAAATTGGTTAAAGGAATTTGTGGGGTTAAGATTAAAGAGGTCAAGGAAGAAGAATCTGATGGAAGGAGATCAGAACAAGAGAAAAGTGAAGGTGATCACATTCCTAGTGCTGTTGGAGAGACAAGCCAAAAGGGGTCTAAAGAGTCTGAAGTTCAGGAAATGGAGGAGAGTGAACATTCTATGGAGAAGAAGGAAGAAGTGTCTAACAAGATGCTTGATGATTCCAACAGGAAAATAACTAAGGATACTGTACATAAAGAATTAGAAGAATCTAAAGTTGGAACTGATGGTGAAAATGGAGATAGTTTTAGAGAAGTTGGAAAGGAAGAATATGAAGTGAAGAAGACATCAGAACCAGAGCAAAAAGTTGGAGTAGCCACCTCACAGAAAATTGGAGAAGCAAGCCAAAAGGAAATCAAAGAATTAAAGTTGAAGAATGAGGATGGAAGAGTAAAACCATCAGCAAAGGGGAAAAGTGTAGATGAAGGTATGCCTAAAGACATTGGAGGAGATACAAGACAAGATAAAGAGTTGAAGGTTCAAGAAATGGAGGGCAATGAAGGTTTTGTAGAGAAGGAGGAGAAAGGAGCAAGTGAAAATATGCTTGATGATGCCAATGCAAACATAATTGGAGAGGTGATCCAGAAAGAAGAAGAATCCAAGTCAGAAATTAAGGAAAGAGATGGAGAAAGTGTGAAAGAAAATAATGTGAGAGCAGGACATAAAGGAATGAAGATATCAGAAATTGAGCAGAATGTAGGTGCAGATGTCACACAGAATATTGGAGATAAAATCCAAAGAGTATCTAAAGATTCTGTTATAGAACAAATGGGGGGAAACAAAAGTATTGTAGAGAATATGGAGAGAGAAGAGCCAGAAGAGATGGTTGTTGAAGCCAATGTGTCTACTGAAGGAGAGACACTTGGAGAGTCAAACCAAAAACAATTTGGAGAACCGAGTTCTGAAACTGAGGATAGACTAAATGAAAGTCTGAAGGAAAATAGAATGGAAACAATGAAGGCCCCACAACTTGACCAAAATGTAGATGATCAGATTCCTGCTAACATTGGTGGTATAAGCCAAGAAGGATATAAGGAGTCCAGGATTCAATGGAAGAAGAAAACTAAAAGCATAAAAGAGAATATGGATGAAGGGAAATCTGAAAAAATTCCTATTCAGGCAAGTAAGGATGGTAAAAAGCACATATATGGCAAGAGCATGCAAGAGAACATTAAAAAGCCTAGGATTCAAACAGGGAATAAAGATCATATTCTGCCTAAGATTGAAACTGGGAATGGAGATCAAGTATATGATGGAGTAAAGGCTGGTAAGGAAGAATTTGATTTAATGGAAATAAGAAGGAAAGAATTTCCTCAGAAGTTACCAAAAGGCACAACTGAGGATGGCAAAAGGTTGAGTGTTTCAAAAATGCAAGAAACTGAAGATGTCAAAGAAGCAAAGATCAAAACAAAATGGAAAGATAATGAATATTTGGTGGATAAGGATGAAGGTGAAGAACTCAGAAGGATGCACAAGGAAGCCAAAAAAGACTTGGCAAAAAAGACACTGCAAGAAAATGCAGATGTCAAAGAAGAAATGTCCAAAAGAAAAGACGAAGGGATTGAAAAATTTGAAGATAAGGGTGAAAGGAAAGAACACAACAGGTTATATATGGAAGCGAAGGACTTCAAAAAAGAGAAAATACAAGAAAATGAAGATATCCATGAAGCAATTCTAAAAAGAGAAGGCAAAAATAATGAACATTTTGGGGATAAGCGTGGTGAAAACCCCGAAAGGATGCATATGGAAGCAAAGAAGAACATAGCAAAGGAGATAATGCAAGAAACATATGGTGTCAAAGAAGCAATCGTTAAAGGAAAAGGAGAAGAGATTGGAAATTTTACTGATAAGGGTGAAGGTGAAGAACCCACAAAGATTATTACGCATGCAAAGAAAGAATTAACAAAAGAAACAGAGCAAGAAAATGAAAAAGTAAAAGAAGCTATGCTCAAAACGAAAGACAAAGAAATTGAACATTTTGTGGATAAAGGTGAACCCAAAAGCATGGATGTGGAACCAAAGAAGGGCTTAACAGCAAAGACCATGCAAAAAAGTGAACATGTCAGAGAAGCAATGGTCAAAGGAGAAGGCAACGGTTATAAATATTTTGTGAATAAAGGTGTAAGTGAAGGACCCAAAAGGATGCATATAGGACCAAAGAAGGACATGGCAAAAGAGAAATTGCAAGAAATAGAAGGTTCCAAAGAAACAATGGTGAAAATAAAAGGCAAAGAGATTGAAAATTTTGTTGTTAAGGATGGAGGTGAAGAAAACAAGAAGATGAATATGAAACTAAAGAAAGAGTCAACAAAAGAAACAAAGAAAGGAAGTGAAAATGTCAAAGAAGCCATGGGGAAAATGAAAGGCAAAGAGACTAAATATTTTGTAGACAAGGGTGAAGGTGAAGAACTCAAAAGCATGAATGTGGAAGCAAAGAATGAAGATGATAAAGAATGCAAAGATTGTGAATGTTTTGTGGATAAGGGTGAAGGTGAAGAGACCAAAAGGATGCTAATAGAACCAAAGAACGTAGCAAAAGAGACAATGCAAGAAATAAAAGGTGTCAAGGAAGCAATGGTCAAAAGAAAAGGCAAAGAGATTGAAAATTTGGCTGATAAGGATGAAGTTGGGGAACTCACAAAGATGCTTCCGAAGTCAAACAAAGAGTTAACAAAAGAAAAAAAGCAACAAAGTGAAAAAATCAAAGAAGTTATGGTCAAAAGGAATGGCAAAGAGACTGAATATTTTGCAGATAAGGGTGAAGATAAAGAACCCAAAAGCATGTATGTGGAAGAAAAGAAAGACTTAACAACAAAGACTACACAAGAAAGTGAAGAACCCAAAAGGATGCATATCAAACCAAAGGACATAACAAAAGATACAATACCAAAAACGGGTGTCAAAGAGGCAAAGGTCAAAACAAAAGACAAAGAGATTGGAAATTTTGTTCACAAGTATGATGGTGAAGAACACATAAAGATGCTCGTGAAAGAGTTACCAAAAGAAAGAGACAAAGAAAGAGAAAAATTCAAAGAAGTTATGGTACAAAAGAAAGTCAAAGAAACTGAATATTCTATGGATAAGGGTGAAGATGAAGAACCCATAACCATGCATGTGGAAGCAGAGAAGGACTTAACATCAAAGAGTATACTAGAAAGTGAAGATGTGAGAGAAGAAGTGGTCGAAACAGAAGGAAAAGATTATGAATATTTTGTTGATAAGGGTGAGAGTGAAGAACTTAAAATGACAAATATGGAAACAAAGAAGAACACGGGAAAAGAGTCAATGCAAGAAACAAAAGGTGCAAAAGAAGCAATGGCTAAAAGAAAAGGCAAAGAGATTGGAAGTTTTGAAAAGGGTGAAGATAAAGAGACTAAAAGGGTGCATGTGGAAGACAAGAAGGACTTAACAACAGTGACAGTGCAGGAAAGTGATGGTGCCGATGAAGGCAATGTAAACAAATGCTTTTCGGATGAGGGTGAAGATGAAGAACCCAACAGGATGTATTTGGAAACAAGAAAGGATTTTAGAGAAGAGACATTGCATGAAAGTGAAAATGTAAAAAATGTGAAGGTAAAAAGTGAAGGCAAAGACATTGAATGTTTTGCAGATAAGAGTGCAGACAAAGAATCAATAAGGATGCTTATGGGAACAAAGAGAGACTTGACAAAAGAGGAAGTGCATGAAAAAGACGATGTCAAAGAAACTATGATCAAAAGGAAGGGCAAAGAGATTGAGTATTTTGTGGATAACAGTGAAGGTGAAGTTGAAGAATACAAAAGGATGCATATTGAAGAAAAGAAAAACCTAGCAACAAAGACAATGCATGAAATTGAAGATGCCAATGAAGTCATGGTCAAAAGCAAAGAAAATGAGATTGAAAATTTTGGTAAAGAATCCAAAATTAGGGAAACAAAGAAAGACTCAACAAAAGTGACAATGAAAGAAAGTGATGATACCAGAAAAGCAATGGTCAAAAGAAAAGGTAAAGAGGTTGAATGTCTTGTGGATAAGGGAGAAGAACCGAAATGGATGCATACGGAAGCAAAGAAGGACTTAACAACCAAGACAAGAGAAGAAAGGGAAGTTATCAGAGAAGCGATGGTCAAAAGAGAAGGGGAAGAAGAGATGGACTATTTTCTGGAAAAGGGAGAAGATGAGAAAGACATACCAAAAGAGAAAATTCAGATAGTTGAGAAGATTAAGCATGGAATTACGGATAATGATCAACGAAATGTACTAGGAAAAACTACTGAAGGAAAATCTGAAGTACCATCTGAAGAGGGTCCCAAGCTGGTGGGGGAACAAGATGGAAGTAGAGGACTTAAGGTTTCAAACATAGAAGACCCAAAAGAAATTATCAAAGAAGAAATGGCTGAAACAGAAAATTTAATGGAAAAGGTTCAATGGCAAAAGTCTAAGAAGGGCGAAGAAGCAAGGAGAGTTATTCAGAAAAACACAGCAACTGAGATCTTACAGAAAGAAACTGAGTCCAACAATGAAAGGAAGTCCAGAGAAGGACCAAATGTACCAAACAATATGGTCAAAGTCGTATTTGAAGTGTTGGGGACTTTTCAGGCAATGCTTCCCAAGAAGGTGATGGAAGCAATTGGCCAAAATAAGGATAAGAATGAATATGTTACTGTGAAGTTGAAAGCAGAGGGGTCTATAAAGATGCATGTTGAACCAATTGAGGCTTTTGATGAGGATGAAACTGAAGAAAGAAGCGAGAAAGAAGTTAGAAAGCCAGAACTCAAGTCTACTGACCAAATAAGTGGGAAAGAGAATGTTGATTTTGGGGTATTTGATGGAAGAAAGAGACCACAATTTCTAGAGATAGGAGAAACACAAGGCGCAAAAGAAGACAATGCACAAATAGAGGAGTGTGCGAAGAAAATAGATGGAGATCAATCTGAGAAGATACAAGTTGAAGAAAAAGGACGGAAGTCATCTCAGAAAGGAAGAGAAGGTCCAAAGATCCAAACGATGGTAAAAGATCAACATCGTTTGCAAGAAGAAAAGGAAAAGCCCTTGGGAAAAACAACAGCAGCAGAAGATAAGAAGCCTAAAATGGGGGAAATAACTCCAGAGTTTGAGAAGGCTAGTGGATTCAAAATGGCTGAAGAAAATTCGCATGAAAGTAGCAAGAGAGAACATCAAATAATGACTCCAAAGAAAGAAGTTGAAAAATCAAAGAAGGAAGAGCATTCTCCTATGCCTACAGCAAGCCAAAGAAAAGAACCTCTTGAATTATCACTGCCAAGCAAGGACTACAAAACTTCAAAGATAGAGGAAGTACAACAAAAGGAGGGAAAAATAACCATGCATTTACTAGAAGCAACCTTTTCCAAAGAAGGAGAACTTGCACAAGCCATAGCTACACATTCAAAAGAAAAAAGTGAGATTGATGAGCTGCAGGTAAATCAACTACCATCTCCATCTACAGAAATGGGGAGTACAGAACCACGTGAATCAGAAAAGTATGGTTTGAAAGAAGATGGCTATAAGGCTGTGAGTTTAGATCATATGCAAGAAGGAAAAGATGAAACGGATGAACCATCAAAATTTCCAAGTTCATCTTCCACTCAACCATTTGAAGTTGAAGGAAAGGATAAGATAAATGCTAGTTGTGATGATGAATCTCAAGATTCAGACACGGACTCTGAAATAGATGGGGAAACATCAAACCAAGGTGAAACAGACGAAGAAGTTGTACAAAGAGAGACACCCCAGCCAGAGTCCCCTGAAGATCAACAATGCACCCACAAAGCTCTGGAAGAAAGCAATGGAACACATGAAATAGAAGAAGAAAAGACAGATGAACAAGGAGATGAATCCGATCAGGAAGAGTTGGACGAGCAAAAAGAAGGTGAGGAGGAAGCCATTGGAGGGAAGAAGGACCAGAAAAGGTCAAAGAAACTAATCATTTCCACCATCATAGCAGGATCAGCCCTTCTTGCTTCTGGAATATTTCTTATCATTCGACAAAGAAGATCCATAAAAGGAAACATCTTCGATGCGGCGTTGGCGATTGGCGTGGGTTTGTTCGGCGATCCACTTGCAGCGTTGGTTAGGATAAGAGAGAGGATGCCATGGCTTCTGGTTGAGATAGGAGTGGCTCCAGGCAGTGCCAGATTTGGTCTTGTAATCAACTTATGCCTCCTCCTTCTTCCCCTTCCATCACATAGATTCTCAATTCTTCTTCACCTCTGA 6645 0.3762 MDLELGLKITKTRDDIASISEYRLAKAGPVFQSRETNTAFILTAHLKGFKKNNINIKISEDGNKISVSGEKPVQNILMMGWLMHRKEVDVAGFNKVFRIPDGVKLDGIKAKYDEDEWIMNIIMPKLVKGICGVKIKEVKEEESDGRRSEQEKSEGDHIPSAVGETSQKGSKESEVQEMEESEHSMEKKEEVSNKMLDDSNRKITKDTVHKELEESKVGTDGENGDSFREVGKEEYEVKKTSEPEQKVGVATSQKIGEASQKEIKELKLKNEDGRVKPSAKGKSVDEGMPKDIGGDTRQDKELKVQEMEGNEGFVEKEEKGASENMLDDANANIIGEVIQKEEESKSEIKERDGESVKENNVRAGHKGMKISEIEQNVGADVTQNIGDKIQRVSKDSVIEQMGGNKSIVENMEREEPEEMVVEANVSTEGETLGESNQKQFGEPSSETEDRLNESLKENRMETMKAPQLDQNVDDQIPANIGGISQEGYKESRIQWKKKTKSIKENMDEGKSEKIPIQASKDGKKHIYGKSMQENIKKPRIQTGNKDHILPKIETGNGDQVYDGVKAGKEEFDLMEIRRKEFPQKLPKGTTEDGKRLSVSKMQETEDVKEAKIKTKWKDNEYLVDKDEGEELRRMHKEAKKDLAKKTLQENADVKEEMSKRKDEGIEKFEDKGERKEHNRLYMEAKDFKKEKIQENEDIHEAILKREGKNNEHFGDKRGENPERMHMEAKKNIAKEIMQETYGVKEAIVKGKGEEIGNFTDKGEGEEPTKIITHAKKELTKETEQENEKVKEAMLKTKDKEIEHFVDKGEPKSMDVEPKKGLTAKTMQKSEHVREAMVKGEGNGYKYFVNKGVSEGPKRMHIGPKKDMAKEKLQEIEGSKETMVKIKGKEIENFVVKDGGEENKKMNMKLKKESTKETKKGSENVKEAMGKMKGKETKYFVDKGEGEELKSMNVEAKNEDDKECKDCECFVDKGEGEETKRMLIEPKNVAKETMQEIKGVKEAMVKRKGKEIENLADKDEVGELTKMLPKSNKELTKEKKQQSEKIKEVMVKRNGKETEYFADKGEDKEPKSMYVEEKKDLTTKTTQESEEPKRMHIKPKDITKDTIPKTGVKEAKVKTKDKEIGNFVHKYDGEEHIKMLVKELPKERDKEREKFKEVMVQKKVKETEYSMDKGEDEEPITMHVEAEKDLTSKSILESEDVREEVVETEGKDYEYFVDKGESEELKMTNMETKKNTGKESMQETKGAKEAMAKRKGKEIGSFEKGEDKETKRVHVEDKKDLTTVTVQESDGADEGNVNKCFSDEGEDEEPNRMYLETRKDFREETLHESENVKNVKVKSEGKDIECFADKSADKESIRMLMGTKRDLTKEEVHEKDDVKETMIKRKGKEIEYFVDNSEGEVEEYKRMHIEEKKNLATKTMHEIEDANEVMVKSKENEIENFGKESKIRETKKDSTKVTMKESDDTRKAMVKRKGKEVECLVDKGEEPKWMHTEAKKDLTTKTREEREVIREAMVKREGEEEMDYFLEKGEDEKDIPKEKIQIVEKIKHGITDNDQRNVLGKTTEGKSEVPSEEGPKLVGEQDGSRGLKVSNIEDPKEIIKEEMAETENLMEKVQWQKSKKGEEARRVIQKNTATEILQKETESNNERKSREGPNVPNNMVKVVFEVLGTFQAMLPKKVMEAIGQNKDKNEYVTVKLKAEGSIKMHVEPIEAFDEDETEERSEKEVRKPELKSTDQISGKENVDFGVFDGRKRPQFLEIGETQGAKEDNAQIEECAKKIDGDQSEKIQVEEKGRKSSQKGREGPKIQTMVKDQHRLQEEKEKPLGKTTAAEDKKPKMGEITPEFEKASGFKMAEENSHESSKREHQIMTPKKEVEKSKKEEHSPMPTASQRKEPLELSLPSKDYKTSKIEEVQQKEGKITMHLLEATFSKEGELAQAIATHSKEKSEIDELQVNQLPSPSTEMGSTEPRESEKYGLKEDGYKAVSLDHMQEGKDETDEPSKFPSSSSTQPFEVEGKDKINASCDDESQDSDTDSEIDGETSNQGETDEEVVQRETPQPESPEDQQCTHKALEESNGTHEIEEEKTDEQGDESDQEELDEQKEGEEEAIGGKKDQKRSKKLIISTIIAGSALLASGIFLIIRQRRSIKGNIFDAALAIGVGLFGDPLAALVRIRERMPWLLVEIGVAPGSARFGLVINLCLLLLPLPSHRFSILLHL 2214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1614 1628 - -
Vian8g00881 2214 Coils Coil 775 799 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 396 555 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1774 1900 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1183 1206 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1441 1474 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 464 478 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 702 723 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 443 463 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1223 1311 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1846 1885 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 139 158 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 904 931 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1933 2111 - -
Vian8g00881 2214 Gene3D - 26 129 IPR008978 -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 338 369 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 579 604 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 649 673 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 2063 2081 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1774 1839 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1614 1655 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1223 1283 - -
Vian8g00881 2214 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 21 141 IPR002068 -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 490 532 - -
Vian8g00881 2214 CDD ACD_sHsps-like 34 125 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1059 1107 - -
Vian8g00881 2214 Coils Coil 1393 1413 - -
Vian8g00881 2214 Coils Coil 1031 1051 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 170 229 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 267 378 - -
Vian8g00881 2214 SUPERFAMILY HSP20-like chaperones 29 125 IPR008978 -
Vian8g00881 2214 Coils Coil 171 191 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 267 324 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 428 442 - -
Vian8g00881 2214 Coils Coil 636 663 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1964 1998 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1718 1735 - -
Vian8g00881 2214 Coils Coil 1595 1615 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 2082 2101 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1296 1311 - -
Vian8g00881 2214 Coils Coil 1932 1952 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1949 1963 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1706 1744 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 139 229 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 1552 1593 - -
Vian8g00881 2214 MobiDBLite consensus disorder prediction 2024 2042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00881 Vian-Chr8 20635641 20646160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00881 - - vra:106760392 2632.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00881 8 20635641 20646160 Vian8g00881 8 20635641 20646160 ECH
Vian8g00881 8 20635641 20646160 Vian3g00715 3 7496242 7496916 PCT