Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00715 ATGGAGGTTGAGTTGGGGCTGAAGATCACAAGAACCAAAGATGATAACACTTCCGTTTCTGATTTTCAGTTTGCCAAAGACAGATCTGGACCTGTCTTCTTTTCCAAAGAAACTGATTCAAAGCTCATCCTCACTGCACATCTTAAAGGGTATAAGAAAGAGGACATTGACATCAATATCAGTAAAGATGGGAGTGAGATTTCGGTGAGTGGGGAGAAGGAGGTGCAGGAAATGCAAATGATACCGTTCAAGAAAGAGGTGAAAACCAAAGGGTTTGCGAAGAAGTTTAGAATTCCTGATAGGGTGGTTTTGGATCGGATCAAGGCTAAGTATAACGAAGTGGATGCAGTGTTGACAATTGTGATGCCAAAAATGGAATTGGGAAAAGGAGTGACAGAAATTGAGGAGGTGCAGGAAAGAGAAGAGGTGGATAGCGTGACGGCAGAGCCAGAAAAGATAGAAGAAGGAACAGCTCCAGTGAAGAAGCCCGAAAAACCATGGACTCCTTGTCCTCCTTTCTATTTTGGAGGATCAACTTTGCTTCTAACTCTTCTATTTCTTGTAATGCACTATATTAGAGTCAGAAAGAGTTAA 594 0.4192 MEVELGLKITRTKDDNTSVSDFQFAKDRSGPVFFSKETDSKLILTAHLKGYKKEDIDINISKDGSEISVSGEKEVQEMQMIPFKKEVKTKGFAKKFRIPDRVVLDRIKAKYNEVDAVLTIVMPKMELGKGVTEIEEVQEREEVDSVTAEPEKIEEGTAPVKKPEKPWTPCPPFYFGGSTLLLTLLFLVMHYIRVRKS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00715 197 Pfam Hsp20/alpha crystallin family 36 128 IPR002068 -
Vian3g00715 197 Gene3D - 9 135 IPR008978 -
Vian3g00715 197 MobiDBLite consensus disorder prediction 140 161 - -
Vian3g00715 197 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 140 IPR002068 -
Vian3g00715 197 MobiDBLite consensus disorder prediction 140 162 - -
Vian3g00715 197 PANTHER HEAT SHOCK PROTEIN 26 1 162 - -
Vian3g00715 197 SUPERFAMILY HSP20-like chaperones 31 129 IPR008978 -
Vian3g00715 197 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00715 Vian-Chr3 7496242 7496916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00715 - - gmx:100799556 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00881 8 20635641 20646160 Vian3g00715 3 7496242 7496916 PCT