Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01990 ATGGGAAGAATTTCAAGGACCAGGAGTTACGCAATTGCCTCTTCAATGCAAGATAACCAAAACCAACCACCTTTCGTTACATGCACCACTTTTAACATTCTTGCACCAATATACAAGCGTCTCAACCATGAGGATCAGAATTGCCGTGAAAGTGACTTCAAAGCATGCTGGTTGGCCAGGAATCAAAGGATATTGGATTGGTTGTTGTATGAGAGATCTTCCATAATCTGTCTTCAGGAATTTTGGATTGGAAACGAAGAGCTTGTTGATTTGTATGACAAGAGACTTGGTGATACTGGTTATATTAATTTCAAGCTTGCAAGGACCAACAATCGTGGTGATGGTCTTCTGATAGCAGTGCAAAAGGAATATTTCACAGTTGTTAACTATAAAGAGTTGCACTTTAATGATTGTAGTGATCGAGTAGCTCAACTGTTACACGTTGAGTTAGCTTTTCCCTTTTCACAGTGTCAAAACAGTGATGTTAGGCACGAAATTCTGATTGTCAACACTCACCTACTGTTTCCTCATGATCCGAGTCTTTGCCTTGTACGACTGCATCAAGTCTATAAGTTACTTCAATATATCGAATCTTATCAGAATGAGCACCAACTTAAGCCTTTGCCGATCATATTATGCGGTGACTGGAATGGAAGCAAAAGGGGACATGTTTACAAGTTCCTGAGGTCTCAGGGGTTTGTATCATCATATGATATTGCACATCATTACACTGATGCTGATGCTCACAAGTGGGTTAGCCACCACAATCATCTTGGAAACGTATGTGCTGTTGATTTTATATGGCTTCTTAACCCTGACAAATATCAAAAACTACTTCAAACAAGTTGGAGTGAAGCACTATTTAGCATGTTTAAGTATCTATTGCGAAGAGATTCACTGACAGAGAGAGATGCATTTGTTTTTCTAAAGGTTGACAAGGAAGATTGTATTACCTATTCTAGTTTCTGTGCAGCACTTAGACGGCTTAATTTAATTGGTCATTGTCATGGGTTAAGTGTCGAAGAGACGAAGGACTTGTGGGTTCAAGCAGAGATAAATGGAAATGGTGTTATTGATTATAAAGGATATCTGCAGCAAATCTGGAATCCAACAGGATCAGATCAAAGAGATGACAAAAATGGGCAACATGATGATGAGGCAGATGGTAGTGAAACAATTGGTTTTAATGTAAAAAATGCAGTTCTTTTCCCCCCAGAGGTGGAAAAAGGTAGATGGCCTGAAGACTACTCTCTCTCTGATCATGCAACACTCACTGTAGTGTTCTCACCCATAAGAATGCTATGCCACACTACAAAATAA 1320 0.3932 MGRISRTRSYAIASSMQDNQNQPPFVTCTTFNILAPIYKRLNHEDQNCRESDFKACWLARNQRILDWLLYERSSIICLQEFWIGNEELVDLYDKRLGDTGYINFKLARTNNRGDGLLIAVQKEYFTVVNYKELHFNDCSDRVAQLLHVELAFPFSQCQNSDVRHEILIVNTHLLFPHDPSLCLVRLHQVYKLLQYIESYQNEHQLKPLPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIAHHYTDADAHKWVSHHNHLGNVCAVDFIWLLNPDKYQKLLQTSWSEALFSMFKYLLRRDSLTERDAFVFLKVDKEDCITYSSFCAALRRLNLIGHCHGLSVEETKDLWVQAEINGNGVIDYKGYLQQIWNPTGSDQRDDKNGQHDDEADGSETIGFNVKNAVLFPPEVEKGRWPEDYSLSDHATLTVVFSPIRMLCHTTK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01990 439 Gene3D Endonuclease/exonuclease/phosphatase 5 433 IPR036691 -
Vian7g01990 439 MobiDBLite consensus disorder prediction 371 391 - -
Vian7g01990 439 SUPERFAMILY DNase I-like 25 239 IPR036691 -
Vian7g01990 439 Pfam Endonuclease/Exonuclease/phosphatase family 36 238 IPR005135 GO:0003824
Vian7g01990 439 FunFam Putative calcium-binding protein 9 432 - -
Vian7g01990 439 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 15 428 - -
Vian7g01990 439 MobiDBLite consensus disorder prediction 376 391 - -
Vian7g01990 439 SUPERFAMILY EF-hand 282 366 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01990 Vian-Chr7 32331382 32334730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01990 2 332 EF-hand Containing Proteins AT5G54130 71.687 7.70e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01990 - - gmx:100792805 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01990 7 32331382 32334730 Vian4g01273 4 25689674 25693241 PCT