Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01753 ATGGCTGCAGACCCTCAGAAAATTCATCCTGTCTATGATGTTGAAGCACCAAACCACCCTTCAGCACCTTTGGTGCCAAGAAGCATGTCTAAATCAGATGCAGGTGATCCAGAGAGAGTAGTGCTACAACAACAGCAACAGCAACAACAACCTCCTCCACAACGCACCATTCCTGTGATGCATCCCAGGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTGATAAGCATATTGGTGATTCTGATTGTGGCCATTGCCATTACAGTTGGGATACTATACCTTGTGTTCAGACCAAAGGTTCCAAAGTACTCTGTGGATGAGCTTATAGTCACACAGTTTGATATCTCTGAGAACAACAGTTTATCTGCCACTTTCAACTTGACAATCACTGCCAGAAACCCTAACAAGAAGATTGGAATATACTACAGAGGTGGCAGCCATATAAGTGCGTGGTATGAGGACACAAAACTGTGTGAAGGGTCTTTACCAAAGTTCTACCAAGGTCACCGCAACACCACAGTGCTCAGTATCCCTCTCACTGGTCAAACACAGGATGCTACTGGTCTGCAAACTAGCCTTCAGCAGCAGCTGCAAGACACAGGAAATGTGCCTCTCAATTTGAAGGTCAATCAGCCTGTGAGGATCAAATTTGGGAAGTTGACACTGTTCACAATCAAGTTCAGGGTTAGGTGCAATATTGTGGTGGACAACCTTAGTGCTAATAGTTCTATTAGAATTCAGAGCAGTAGTTGTAAATTCAGGTTAAGGCTGTGA 789 0.4449 MAADPQKIHPVYDVEAPNHPSAPLVPRSMSKSDAGDPERVVLQQQQQQQQPPPQRTIPVMHPRPPKKRRSCCCRFFCWLISILVILIVAIAITVGILYLVFRPKVPKYSVDELIVTQFDISENNSLSATFNLTITARNPNKKIGIYYRGGSHISAWYEDTKLCEGSLPKFYQGHRNTTVLSIPLTGQTQDATGLQTSLQQQLQDTGNVPLNLKVNQPVRIKFGKLTLFTIKFRVRCNIVVDNLSANSSIRIQSSSCKFRLRL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01753 262 MobiDBLite consensus disorder prediction 39 54 - -
Vian7g01753 262 MobiDBLite consensus disorder prediction 1 66 - -
Vian7g01753 262 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 38 244 - -
Vian7g01753 262 Gene3D - 100 244 - -
Vian7g01753 262 Pfam Late embryogenesis abundant protein 133 237 IPR004864 -
Vian7g01753 262 SUPERFAMILY LEA14-like 112 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01753 Vian-Chr7 27489228 27490016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01753 40 262 EF-hand Containing Proteins AT5G21130 30.531 8.71e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01753 - - gmx:100782663 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01753 7 27489228 27490016 Vian7g01753 7 27489228 27490016 ECH
Vian6g00776 6 24793476 24794207 Vian7g01753 7 27489228 27490016 PCT