Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00776 ATGATGGCGGAACACCAAAGAATTCATCCTGTTCATGATGTGGAGGCACCACACAGACCTCTGGTGCCTGGAAACAGTACTAAATCTGATAGGGTTTTTCCTAAACGGGCCTTTCCAGTGATGCATTCGAAGCCACCAAAGAGAAGAAGAAGCTGTTGCTGCAGGTTTTTGTGTTGGACGCTTAGCATATTGCTGATATTGATCATTGCTATTGGGATCACTGTAGGGATCATGTACCTTGTTTTTAGGCCAAAGCTGCCAAAATACTCAGTGGATGAACTGAGGATAACCCAGTTCAATGTTTCTGACAACAACACCCTCTCAGCATCCTTCAATGTGGCAATCACTGCAACAAATCCAAACAAGAAGATTGGAATATACTATGAGGGTGGAAGCCACATAAGGGCTTTGTACATGGGCACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGTCACAGGAACACCACAGTGCTTGATCTGTCTCTATCAGGTGAAGCACAGGATGCAAGTTCCTTAACAAGTAGAATTCAGGAGCAGCTGCAGCAGACCAACAATATTCCTCTTGATCTTAAGGTTAATCAACCTGTTAGGGTTAAGCTTGGCAAGTTGAAGCTCTTCAAAGTCAAGTTCAGGGTTAGCTGCAAGCTTGTGGTGGATAATCTTGGTGCTAGTAATGATATTAGCATTTCAAGCAATAGTTGTAAGTTCAGACTTAGGCTATGA 732 0.4344 MMAEHQRIHPVHDVEAPHRPLVPGNSTKSDRVFPKRAFPVMHSKPPKRRRSCCCRFLCWTLSILLILIIAIGITVGIMYLVFRPKLPKYSVDELRITQFNVSDNNTLSASFNVAITATNPNKKIGIYYEGGSHIRALYMGTQLCEGSLPKFYQGHRNTTVLDLSLSGEAQDASSLTSRIQEQLQQTNNIPLDLKVNQPVRVKLGKLKLFKVKFRVSCKLVVDNLGASNDISISSNSCKFRLRL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00776 243 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 29 224 - -
Vian6g00776 243 Pfam Late embryogenesis abundant protein 115 218 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00776 Vian-Chr6 24793476 24794207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00776 47 243 EF-hand Containing Proteins AT5G21130 30.964 2.07e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00776 - - gmx:100789322 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00776 6 24793476 24794207 Vian6g00776 6 24793476 24794207 ECH
Vian6g00776 6 24793476 24794207 Vian7g01753 7 27489228 27490016 PCT