Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01707 ATGGCTCTGTGTTCCCCTGTTTCCCTCTTTTCACTTCTCTGTACGGTGTTGTTGTTTTCCGCTTCCTCCTCCGCCAAACATGATTCGGTCTCGTTCTCTTTCCCTCTCAGGTCGCTTCCCATCTCCGCAGGGAAGCCTCTGAAGACGAACCCAAAACTGAGAAGCCTTTCCTCTGCCTCGTACAACGTAAAGTTGCCGTTCAAGTACTCGATGGCTCTGGTGGTAAGCCTCCCCATAGGGACACCTCCGCAGCATCAACAAATGGTTTTGGATACAGGAAGCCAACTCTCGTGGATTCAGTGTCGTAATAAAACTCCCCCAACGGTGTCCTTTGACCCTTCTCTCTCTTCCTCCTTCTACGTCATCCCCTGCACCCACCCTCTCTGCAAACCTCGCGTCCCCGATTTTACTCTCCCAACAACATGCGACCAGAACCGCCTCTGCCACTACTCCTACTTCTACGCCGATGGCACCTACGCCGAGGGCAACCTCGTCCGAGAAAAACTAACCTTCTCACCTTCCCAAACAACCCCTCCACTTACCCTCGGCTGCGCTACCGAGTCCCGCGACGCCGGCGGAATTCTCGGAATGAACCTCGGCCGCCTTTCCTTTCCCTCGCAGGCCAAAATCACCAAATTCTCGTACTGCGTACCCACGCGAGTATCCGGATCCGGGAACCTCCCAACCGGGTCGTTCTACCTCGGCAACAACCCCAACTCCGCGCGCTTCCGTTACGTCAGCATGTTGACGTTTAGTCAAAGTCAACGCATGCCGAATTTGGACCCGCTGGCCTACACCGTCCCCATGCAGGGAATTAGAATTGGTGGCAAGAGGCTAAACATCAATCCTTCCGTTTTCCGCCCGGACGCCGGCGGGTCGGGGCAGACGATGATCGACTCAGGATCCGAATTCACCTTCTTGGTCGACGAGGCTTACGACAGGGTGCGGGAGGAGGTAGTTAGAGTTGTTGGCCCAAGGATTAAGAAGGGGTACGTGTACGGCGGAGTCGCGGACATGTGTTTTGACGGTTCCGCGAGGGAGTCAATCGGACGGCTGATAGGGGACGTGGTGTTGGAATTCGAGAAAGGCGTTGAGATAGTGGTTCCAAAAGAGAGGGTGCTGGCTGACGTGGGCGGTGGGGTCCACTGCGTGGGAATTGGCAGGTCGGAGAGATTGGGTGCAGCCAGCAACATCATAGGGAACATCCATCAGCAGAATCTGTGGGTGGAGTTCGACCTGGCGAATCACAGAATCGGGTTCGGCGAAGCCGATTGTAGCAGATCGTAG 1287 0.5563 MALCSPVSLFSLLCTVLLFSASSSAKHDSVSFSFPLRSLPISAGKPLKTNPKLRSLSSASYNVKLPFKYSMALVVSLPIGTPPQHQQMVLDTGSQLSWIQCRNKTPPTVSFDPSLSSSFYVIPCTHPLCKPRVPDFTLPTTCDQNRLCHYSYFYADGTYAEGNLVREKLTFSPSQTTPPLTLGCATESRDAGGILGMNLGRLSFPSQAKITKFSYCVPTRVSGSGNLPTGSFYLGNNPNSARFRYVSMLTFSQSQRMPNLDPLAYTVPMQGIRIGGKRLNINPSVFRPDAGGSGQTMIDSGSEFTFLVDEAYDRVREEVVRVVGPRIKKGYVYGGVADMCFDGSARESIGRLIGDVVLEFEKGVEIVVPKERVLADVGGGVHCVGIGRSERLGAASNIIGNIHQQNLWVEFDLANHRIGFGEADCSRS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01707 428 Gene3D Acid Proteases 56 230 IPR021109 -
Vian7g01707 428 Pfam Xylanase inhibitor C-terminal 264 421 IPR032799 -
Vian7g01707 428 ProSiteProfiles Peptidase family A1 domain profile. 73 421 IPR033121 -
Vian7g01707 428 CDD pepsin_A_like_plant 74 425 IPR034161 -
Vian7g01707 428 PRINTS Pepsin (A1) aspartic protease family signature 296 307 IPR001461 GO:0004190|GO:0006508
Vian7g01707 428 PRINTS Pepsin (A1) aspartic protease family signature 397 412 IPR001461 GO:0004190|GO:0006508
Vian7g01707 428 PRINTS Pepsin (A1) aspartic protease family signature 79 99 IPR001461 GO:0004190|GO:0006508
Vian7g01707 428 Gene3D Acid Proteases 232 428 IPR021109 -
Vian7g01707 428 PANTHER ASPARTYL PROTEASE-RELATED 12 426 IPR001461 GO:0004190|GO:0006508
Vian7g01707 428 FunFam Aspartyl protease family protein 53 231 - -
Vian7g01707 428 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 88 99 IPR001969 GO:0004190|GO:0006508
Vian7g01707 428 SUPERFAMILY Acid proteases 74 426 IPR021109 -
Vian7g01707 428 Pfam Xylanase inhibitor N-terminal 74 230 IPR032861 -
Vian7g01707 428 FunFam aspartic proteinase PCS1 235 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01707 Vian-Chr7 26751792 26753078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01707 75 427 Miscellaneous Gene Families AT1G44130 22.901 1.20e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01707 - - gmx:100790706 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01707 7 26751792 26753078 Vian7g01707 7 26751792 26753078 ECH
Vian2g02674 2 47636946 47638322 Vian7g01707 7 26751792 26753078 PCT