Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02674 ATGCCATACTCTCCTTCGACAAACACTAACATCATCATGACTCCGACCCTCTTCTTCCTCTTCGTCTTCTTCTTTCCTCTTCTCTCCTCTGCACACAACTCCTTGCACCTCAACCACACCTCATTCTCACTCTCTTTCCCTCTCACTTCACTCCCTCTCTCCACCAACACCGCCTCCAAGATGCTACGTGACTCTCTCATTGTCTACTCCAACCGCACCAGAAATACTACGCGACTCGCTTCGCCTTCTTCTCCGTATAACTACAGGCTAACCTTCAATTACTCCATGGCTTTGATCGTCAACCTTCCCATTGGGACCCCACCGCAGGTTCAGCCTATGGTGTTGGACACCGGAAGCCAACTATCGTGGATTCAGTGTCACAGAAAACCACCCAAGGTGCCTCCCCCAACGGTGTCCTTTGATCCTTCTCGCTCCTCCACTTTCTCTAATCTTCCCTGTACTCACCCCGTTTGCAAACCACGAATTCCCGATTTTACCCTCCCCACTTCCTGCGACCAGAACCGCCTCTGTCACTACTCCTACTTCTACGCCGACGGTACCTACGCCGAGGGAAATCTCGTCAGAGAAAAATTCACTTTCTCTCGTTCCCTTTTTACCCCTCCTTTGATCCTCGGCTGCGCCACTGAGTCCACCGACCCCAGGGGTATTTTGGGAATGAATCGTGGACGCCTCTCCTTCGCTTCACAATCTAAAATTACCAAATTCTCCTACTGCGTTCCCACCCGAGAAACCCGGCCTGGATCCACTCCAACCGGGTCGTTCTACCTGGGCCACAATCCGAACTCTCTCCGGTTTCGGTTTATCCCAATGTTGACTTTTTCTCAGAGTCAACGTATGCCAAATCTTGATCCCTTGGCTTATACTGTCGCCTTGCAGGGGGTCAGAATCGGGGGCAGAAAACTGAACATTTCGCCGGCGGTTTTTCACGCCGACGCTGGCGGGTCGGGTCAAACCATGGTTGACTCCGGATCCGAGTTTACTTACCTCGTTAATGAGGCTTATGATAAGGTGCGGGCGGAAGTAGTGAGGACTGTGGGGTCCAGAATGAAGAAGGATTACGTGTACGGTGGCGTTGCGGACATGTGCTTCGACGGGAATGCGATTGAGATCGGACGGCTGATAGGGGACATGGTGTTTGAGTTCGAGAAGGGCGTGGAAATAGTGATTCCCAAGGAGAGGGTTCTGGCTTCCGTGGAGGGCGGGGTCCACTGCGTCGGGATTGGCAACTCTGATAAATTGGGTGCGGCCAGTAACATCATCGGGAATTTCCATCAGCAGAATCTGTGGGTGGAGTTTGATCTCGCCAATCGCAGAGTTGGTTTCGGTGCGGCTGATTGTAGCAGATTGGCTCCATAG 1377 0.5243 MPYSPSTNTNIIMTPTLFFLFVFFFPLLSSAHNSLHLNHTSFSLSFPLTSLPLSTNTASKMLRDSLIVYSNRTRNTTRLASPSSPYNYRLTFNYSMALIVNLPIGTPPQVQPMVLDTGSQLSWIQCHRKPPKVPPPTVSFDPSRSSTFSNLPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRETRPGSTPTGSFYLGHNPNSLRFRFIPMLTFSQSQRMPNLDPLAYTVALQGVRIGGRKLNISPAVFHADAGGSGQTMVDSGSEFTYLVNEAYDKVRAEVVRTVGSRMKKDYVYGGVADMCFDGNAIEIGRLIGDMVFEFEKGVEIVIPKERVLASVEGGVHCVGIGNSDKLGAASNIIGNFHQQNLWVEFDLANRRVGFGAADCSRLAP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02674 458 FunFam Aspartyl protease family protein 77 260 - -
Vian2g02674 458 FunFam aspartic proteinase PCS1 264 457 - -
Vian2g02674 458 SUPERFAMILY Acid proteases 99 456 IPR021109 -
Vian2g02674 458 Gene3D Acid Proteases 74 264 IPR021109 -
Vian2g02674 458 Gene3D Acid Proteases 265 457 IPR021109 -
Vian2g02674 458 CDD pepsin_A_like_plant 99 453 IPR034161 -
Vian2g02674 458 PANTHER OS07G0603500 PROTEIN-RELATED 55 453 - -
Vian2g02674 458 Pfam Xylanase inhibitor N-terminal 99 254 IPR032861 -
Vian2g02674 458 Pfam Xylanase inhibitor C-terminal 293 449 IPR032799 -
Vian2g02674 458 ProSiteProfiles Peptidase family A1 domain profile. 98 449 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02674 Vian-Chr2 47636946 47638322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02674 100 456 Miscellaneous Gene Families AT1G44130 22.785 1.09e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02674 - - var:108326882 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02674 2 47636946 47638322 Vian2g02674 2 47636946 47638322 ECH
Vian2g02674 2 47636946 47638322 Vian7g01707 7 26751792 26753078 PCT