Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01698 ATGGCTGTGCATTTTCTTCTTCTGCTTTTTGCAGTGTCTCTTGTTGCGGCTGACGACGATGCATTTATTGGAGTGAACATTGGAACAGATCTCTCTGATATGCCACATCCTACTCAAGTAGTAGCTCTACTTAAAGCCCAGCAAATCCGGCATGTTCGATTGTATGATGCAGACCAAGCTATGCTCCTTGCACTTGCAAAGACAGGCATTCAAGTTGTTGTGACTGTTCCTAATGAAGAACTCCTTGCAATTGGTCAATCGAATTCCACAGCCGCCAACTGGGTTTCCCGCAATGTGGTAGCACATTATCCAGCCACCAATATCACAGCGATTTGTGTTGGTTCTGATGTTTTAACTTCCCTCCCAAATGCGGCAAAAGTTCTTGTCAGCGCCATTAAGTACATTCATTCAGCTCTTGTTGCATCCAATCTTGATCGCCAAGTTAAAGTTTCCACACCCCTTTCATCTTCCATCATCCTTGATTCATTTCCACCTTCCCAGGCTTTCTTCAACCGTTCACTGAATCCAGTTTTAGTCCCTCTACTTGATTTCTTGCAATCCACTGGATCTTATCTAATGCTGAACATTTACCCTTACTATGACTACATGCAATCAAATGGAGTGATTCCATTAGACTATGCACTCTTCAAAACTCTCCCTCCCAACAAAGAGGCTGTGGATTCAAATACCCTACTTCACTACACCAATGTCTTTGATGCCATGGTTGATGCTGCATACTTTGCTATGGCTTTTCTGAACTACACCAACATTCCTGTAGTAGTGACCGAGTCAGGGTGGCCCTCGAAAGGTGGCTCCAACGAGCCTGATGCAACCATAGACAATGCCAACACTTACAACAGCAATCTGATCAAGCATGTGTTTAACAAAACCGGAACTCCCAAACATCCTGGAATTGCAGTCAGTACTTACATCTATGAGCTCTACAACGAGGACACGAAGCCAGGGCCATTATCTGAGAAGAACTGGGGACTATTTGATTCAAATGGAGCACCTGTTTACATTCTTCGCTTGACAGAATCAGGGGCACTCCTTGCAAATGATACCAGCAATCAAACTTTCTGCATTGCCAAGGATGGTGCTGACCCGAAGATGCTGCAGGCTGCATTAGATTGGGCATGTGGACCAGGGAAGGTTGAATGCTCTCCATTGCTGCAAGGGCAACCATGCTATGAACCAGACAATGTGATTGCTCATGCAAATTATGCTTTTGACACTTACTATCATAAGATGGGAAAAACTCCCGATGCCTGTGACTTTAATGGTGTAGCTACCATCTCCACCTCAGATCCAAGTAAGCTGTTTACTTCAATGGTGTGA 1338 0.4447 MAVHFLLLLFAVSLVAADDDAFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLLALAKTGIQVVVTVPNEELLAIGQSNSTAANWVSRNVVAHYPATNITAICVGSDVLTSLPNAAKVLVSAIKYIHSALVASNLDRQVKVSTPLSSSIILDSFPPSQAFFNRSLNPVLVPLLDFLQSTGSYLMLNIYPYYDYMQSNGVIPLDYALFKTLPPNKEAVDSNTLLHYTNVFDAMVDAAYFAMAFLNYTNIPVVVTESGWPSKGGSNEPDATIDNANTYNSNLIKHVFNKTGTPKHPGIAVSTYIYELYNEDTKPGPLSEKNWGLFDSNGAPVYILRLTESGALLANDTSNQTFCIAKDGADPKMLQAALDWACGPGKVECSPLLQGQPCYEPDNVIAHANYAFDTYYHKMGKTPDACDFNGVATISTSDPSKLFTSMV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01698 445 Gene3D Glycosidases 22 349 - -
Vian7g01698 445 Gene3D - 353 444 - -
Vian7g01698 445 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Vian7g01698 445 FunFam Glucan endo-1,3-beta-glucosidase 4 354 444 - -
Vian7g01698 445 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Vian7g01698 445 FunFam Glucan endo-1,3-beta-glucosidase 3 22 347 - -
Vian7g01698 445 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Vian7g01698 445 SMART X8_cls 359 441 IPR012946 -
Vian7g01698 445 Pfam X8 domain 360 431 IPR012946 -
Vian7g01698 445 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 432 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01698 Vian-Chr7 26648018 26650279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01698 17 438 Glycoside Hydrolase AT1G66250 77.962 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01698 K19891 - gmx:100792634 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01698 7 26648018 26650279 Vian7g01698 7 26648018 26650279 ECH
Vian2g02664 2 47488131 47490868 Vian7g01698 7 26648018 26650279 PCT