Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02664 ATGGCCAAGCACTTTCTTCTTCTTCTTCTTCTTGCAGTATATGTCGCTGCAACTGATGAAGAACCATTCATTGGGGTGAACATTGGAAGAGATCTCTCAGATATGCCTCACCCCACTCAAGTAGTGGCATTACTTAAAGCTCAGCAAATTCGACATGTTAGGTTGTATGATGCTGACCAAGCCATGCTCATTGCCCTTGCAAACACAGGAATACAAGTTGCCGTGTCTGTTCCTAATGAAGAGATCCTAGCAATTGGTCAATCAAACACCACAGCTGCTAAGTGGGTTTCGCGTAATGTGGTGGCTCATTACCCTGCCACTAACATAACATCTATCTGTGTTGGTTCTGAGGTTTTAACCGCCCTCCCCAATGCGGCAAAAGTGCTTGTCAGTGCCCTTAAATTCATTCATTCGGCCCTTCTGGCGTCAAATATTGATCACCAAATTAAAGTTTCAACACCCCTTTCCTCTTCCATGATCCTTGACTCTTTTCCACCTTCACAAGCCTTCTTCAACCGCTCGCTGAATCCAGTCTTGGTTCCAATGTTTGATTTCTTGCAAACCACTGGCTCTTTTCTAATGCTTAACACCTACCCTTACTATGATTATATGAAGTCAGATGGTGTGTTCCCGTTGGACTATGCACTCTTCAAACCCCTCCCTCCAAACAAAGAAGTCATTGATTCTAATACTCTTCTCCACTACTCCAACGTGTTTGATTCTGTGATTGATGCAGCATACTTTGCCATGGCTTTTCTCAACTACACTAACATTCCTGTGGTAGTGAGTGAAACAGGTTGGCCCTCAAAAGGTGACTCTAATGAACCAGATGCAACAGTAGAAAATGCCAACACTTATAACAGCAATTTGATCAAGCATGTGCTTAACGTAACTGGAACTCCCAAACACCCCGGCATTGGTGTTAGTACTTACATCTATGAACTCTACAATGAGGATGCAAAGGCAGGTTCATTGTCTGAGAAGAACTGGGGTTTGTTTGACGCAAATGGGAAACCTATTTATGTTTTACGGTTAACAGAATCAGGAGGAGTGCTGGCAAATGACACCACCAATCAAACTTACTGTGTTGCAAAAGATGGTGCCGATCCCAAGATGCTGCAAGCTGGAATAGATTGGGCATGTGGACCTGGCAAGGTGGATTGCTCTCCTTTGCTGCAGGGACAACTATGTTATGAACCAGACAACGTAGTTGCACACGCAAATTATGCTTTTGACACTTACTATCATCAGATGGGAAAGTCTCCTCAGGCTTGTGATTTCAATGACATGGCTACAATCTCCACCACCAATCCTAGTCATGGATCCTGTGTGTTTCCAGGAAGTCTTGGCAAAAATGGCACCTTCCCTAACGTCACATTATCATCGATGAATTCCACAAATTCAGATTCTTCTGCCTGGAATATACATCATGGTGAATTAGGAATCAGAAACCCTGTAATGATGATAGTAGTTCTGCTCATGGGAGTGGTTTGGCTATAA 1500 0.4347 MAKHFLLLLLLAVYVAATDEEPFIGVNIGRDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALANTGIQVAVSVPNEEILAIGQSNTTAAKWVSRNVVAHYPATNITSICVGSEVLTALPNAAKVLVSALKFIHSALLASNIDHQIKVSTPLSSSMILDSFPPSQAFFNRSLNPVLVPMFDFLQTTGSFLMLNTYPYYDYMKSDGVFPLDYALFKPLPPNKEVIDSNTLLHYSNVFDSVIDAAYFAMAFLNYTNIPVVVSETGWPSKGDSNEPDATVENANTYNSNLIKHVLNVTGTPKHPGIGVSTYIYELYNEDAKAGSLSEKNWGLFDANGKPIYVLRLTESGGVLANDTTNQTYCVAKDGADPKMLQAGIDWACGPGKVDCSPLLQGQLCYEPDNVVAHANYAFDTYYHQMGKSPQACDFNDMATISTTNPSHGSCVFPGSLGKNGTFPNVTLSSMNSTNSDSSAWNIHHGELGIRNPVMMIVVLLMGVVWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02664 499 Gene3D Glycosidases 23 350 - -
Vian2g02664 499 Pfam X8 domain 361 432 IPR012946 -
Vian2g02664 499 Gene3D - 354 446 - -
Vian2g02664 499 SMART X8_cls 360 445 IPR012946 -
Vian2g02664 499 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Vian2g02664 499 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 433 IPR044965 GO:0004553|GO:0005975
Vian2g02664 499 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Vian2g02664 499 FunFam Glucan endo-1,3-beta-glucosidase 3 23 348 - -
Vian2g02664 499 Pfam Glycosyl hydrolases family 17 24 343 IPR000490 GO:0004553|GO:0005975
Vian2g02664 499 FunFam Glucan endo-1,3-beta-glucosidase 4 355 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02664 Vian-Chr2 47488131 47490868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02664 19 468 Glycoside Hydrolase AT1G66250 73.673 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02664 K19891 - gmx:100811077 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02664 2 47488131 47490868 Vian2g02664 2 47488131 47490868 ECH
Vian2g02664 2 47488131 47490868 Vian7g01698 7 26648018 26650279 PCT