Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01658 ATGGTTCAATGCTCTAACAAGGATATTGACACAAGTGCATCTCAACTAAGTTGGTGGTATGTAGATATATCTTATCAAGAACTCAAGAAGGGAACATACAAAGTGAAAAACTCAGATGAAACTTTCATTTGTCCATACTGTCCTGAGAGGAAACAGGATTATAAGTACAGGGAACTCCTTAATCATGCTTCTGGGGTTGGTCGGAGTAGTTCAGAAAAGAGAACAGCAAAAGAGAAGGCAAATCATCTGGCTTTAGTGAAATATTTGGAAAAGGACCTAGCTTATCTGGATGGCACCTCAAAACCTGCAGACAAAGGTGTCAAATTATTCAGCACAGGAGAAACAGTAATGTCTCAGTGCTCTAACAAGGATACTGATACATCTCAAATAAGTTGGTGGTATGTAGATACATCTTACGAAGAACTCAAGAAGGGAAGTTACAATGTAAAAACCTCAGATGTGACTTTCATCTGTCCATACTGCCCTAGGAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCATATATGGTGGGTCGAAGTAGTTCTGAAAAGAAAAGTGCAAGAGAGAGAGCCAATCATCTTGCATTAGTGAAATATTTGGAAAATGATCTTATTATTGTGGATTGCTTGTCAGAGCCTGTTGATAAAGGTACCAACTTAGGACAACCTGAAATAGCTCAATGCTCTAACAAGGAGACTGGTGTGAGTGCATCTCCAGCATCTCCAGCATCTCCTACAATAAACTGGTGGTATGTGGATAAGTTTTACAAAGAACTCAAAAAGGGAAATCATATTGTGCAATCCTCAGATGAGACTTTTTCTTGTCCATACTGCCCTAAAAAGAGAAAACAGGATTATGTGTATAGGGAACTTCTTGACCACGCTTCTGGGGTGGGTCAGAGTATTTCACAAAAGAGAAATGTTCGAGAGAAGGCTACTCATCTGGCCTTGATGAAATATTTGAAAAATGATCTCATGCACATGAGTGATCCATCAAAATCTGCAAATGAAGGTAATCACCCAGTTACTAGAGTGGATCAGAGTAGTTTTCAAGAAAGAAGTGTCAAAGAAGATGCTACTCTTATGGCTTTAGCAAAAGACTTGAAAAAGGATGTCATGAATGTGAGTGGTTCATCATCAAAACCTGTAAATGAAGGAACCATAATAATAAGTCCAGGAGAAGCTCCAATTGGTTGCTGCTCTGACAAAGATAGCAATATGAGTTCATCTCAGATTGGGCGGTATGTAGATAAATTTTATGAAGAACTCAAAATGGGAAGACACTGTGTGAAAACCTCGGATGAGACTTTCACATGCCCATACTGCCCTAATAAAAAGATAAACCGGGATTATGTGTACAGGGAAATCCTTGAACATGCTTCTGGGGTGGGTCAGAGTAGATCACAAAAAAGAAGTTTCATTGAAAGGGCCAATCATCTGGCTTTAGAAAAATATTTGAAAAAGGATGTTATGAATGTGGGTGCTTCATTTCCATCAAAACCTATGGATCAAGGCACAGTAACAGCAACCCCAGGAGAAACCATGATGGGTGACTACTCTCATAAAGATAATAATATAAAGGCAACTCAAATAAGTGGGTGGTATGTGCATAAATCCTATGAAGCACTCAAAAAGGGAAGTCACATTGTGAAAACCTCTGAAATGACTTTCTCATGTCCATACTGCCCTAATAAAAAGAGAAAGCGGGATTATGTGTATAGGGAAATCTTTGAACATGCTTCTGGGGTGGGTCAGAGTAGCTCACAAAAGAGAAGTGCCACTGAAAAGGCTAATCATTTGGCTTTAATGAAATATTTGGAAAAGGATCTTATGAATGTGGATGGTACACCAAAAACTGCAGATGAAGGCAATATCCATTTTGAGGAGCAGTTTGTGTGGCCATGGACTGGGATATTGGTTAATATTCCTACTGCACAGACAGAAGATGGACGTTGTGTTGGGGAAACTGGTTCCAAGTTGAGGGATGCTCACCGAATCAGGGGATTTAATCCTTGTAGAGTCCGGACTCTTTCGGATATCCGGGGTCACTCTGGAACTGCAGTTATGGAATTCAATAAAGATTGGACGGGTTTAGCTAATGCTTTGGCATTTGAAAGAGCATATGAATTAGATCATCGAGGGAAAAAGGACTGGTTTGCTAATACTGAGCAAAAGTCTGGTATTTATGCATGGATTGCTCGAGCTGATGACTACGAGATGAACAATATCATTGGGGAACAACTGCAGAAGATGGGGGATATCCAAACAATATCTGAGCTCGTGAAAGAAGAAGCTCGTATACATGCTAAACTTGTTTCCTGCTTGAACAATACTCTTCAGGTCAAGAAGAAGCGGTTATTGGAGATGGAAGTAAAATACAATGAGACTTCACGTCGCTTGGAAATTGTAATGGAGGAAATAGATAAGCTCACTCAAGACCACAATCAAGAGATGAAGAAAATACAATCAAGTGCAACTCAGCACTTCCAGAACATTTTTAGTGGTCATGAAAGGCTTAAGTTGCAGCTGGAATCTCAGAAAAGAGAGCTCGAGTTGCGGAGAATTGAACTGGAAAAACGTGAAGCACATAATGAAAGTGAAAGAACGAAGTTGGAAGAAGAGATTATGGAGAATGCATTGAAAAATAGCTCTTTGGAAATGGCTGTTCTGGAGCAACAAAAAGCTGGTGAAAATATTTGGAAACTGGCTGCAGATCAAAAGCGGCAAAAAGAACATCTTCGTCATAAAATCGTCAGGCTTGAAAAACAACTGGAAGTGAAACAAAAACTAGAATTGGAGATTCAACAACTAAAAGGAAAATTAAATGTCATGCAATACATTGAGGAAGATGAAGACTCAGAAGTTCTGTATAAGGTGGATGCCTTACACACAGATTTAAGAGAGAAGGAACAATCACTACGAGACCTAGATGCTCTGAACCAGACACTAATTATTAAAGAGCGTCAGAGCAATGATGAGCTACAAGAAGCTCGAAAAGTATTGATTAATGGCATTAAAGAGATATCTTGCCGTGCTGGTGTTGGTGTGAAGAGAATGGGGGAACTTGATATTAGACCATTCCTTGAAGCTATGAAGAAAAAATACAACGATGAGGATGCAGAAGAAAGAGCTTCAGAACTGTGTTCATTGTGGGACGAGTATATAAAGGACCCAGGGTGGCATCCATTTAAAATTACCATAATTGAAGGGAAAGATCAGGAAATCATAGACAATGAAGATGAAAAGTTGAAAGCACTGAAAAATGAGTTGGGTGAAGGAGTCTACAAAGCTGTGGTGACAGCTTTGACCGAGATCAATACATATAATCCGAGTGGGAGGTATACAACCTCCGAATTATGGAATTACGAAGAGGGAAAGAGAGCTACCTTGCAAGAAGGAGTAAAATTGTTATTGATGCAATATAAACTATCTAAACAGAAAAGAGGGACGGTGTAA 3465 0.3937 MVQCSNKDIDTSASQLSWWYVDISYQELKKGTYKVKNSDETFICPYCPERKQDYKYRELLNHASGVGRSSSEKRTAKEKANHLALVKYLEKDLAYLDGTSKPADKGVKLFSTGETVMSQCSNKDTDTSQISWWYVDTSYEELKKGSYNVKTSDVTFICPYCPRRKQDYLYRELLEHAYMVGRSSSEKKSARERANHLALVKYLENDLIIVDCLSEPVDKGTNLGQPEIAQCSNKETGVSASPASPASPTINWWYVDKFYKELKKGNHIVQSSDETFSCPYCPKKRKQDYVYRELLDHASGVGQSISQKRNVREKATHLALMKYLKNDLMHMSDPSKSANEGNHPVTRVDQSSFQERSVKEDATLMALAKDLKKDVMNVSGSSSKPVNEGTIIISPGEAPIGCCSDKDSNMSSSQIGRYVDKFYEELKMGRHCVKTSDETFTCPYCPNKKINRDYVYREILEHASGVGQSRSQKRSFIERANHLALEKYLKKDVMNVGASFPSKPMDQGTVTATPGETMMGDYSHKDNNIKATQISGWYVHKSYEALKKGSHIVKTSEMTFSCPYCPNKKRKRDYVYREIFEHASGVGQSSSQKRSATEKANHLALMKYLEKDLMNVDGTPKTADEGNIHFEEQFVWPWTGILVNIPTAQTEDGRCVGETGSKLRDAHRIRGFNPCRVRTLSDIRGHSGTAVMEFNKDWTGLANALAFERAYELDHRGKKDWFANTEQKSGIYAWIARADDYEMNNIIGEQLQKMGDIQTISELVKEEARIHAKLVSCLNNTLQVKKKRLLEMEVKYNETSRRLEIVMEEIDKLTQDHNQEMKKIQSSATQHFQNIFSGHERLKLQLESQKRELELRRIELEKREAHNESERTKLEEEIMENALKNSSLEMAVLEQQKAGENIWKLAADQKRQKEHLRHKIVRLEKQLEVKQKLELEIQQLKGKLNVMQYIEEDEDSEVLYKVDALHTDLREKEQSLRDLDALNQTLIIKERQSNDELQEARKVLINGIKEISCRAGVGVKRMGELDIRPFLEAMKKKYNDEDAEERASELCSLWDEYIKDPGWHPFKITIIEGKDQEIIDNEDEKLKALKNELGEGVYKAVVTALTEINTYNPSGRYTTSELWNYEEGKRATLQEGVKLLLMQYKLSKQKRGTV 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01658 1154 Pfam XH domain 1020 1150 IPR005379 -
Vian7g01658 1154 MobiDBLite consensus disorder prediction 334 352 - -
Vian7g01658 1154 Coils Coil 839 896 - -
Vian7g01658 1154 Gene3D XS domain 628 797 IPR038588 -
Vian7g01658 1154 CDD RRM_like_XS 634 741 IPR005380 GO:0031047
Vian7g01658 1154 MobiDBLite consensus disorder prediction 334 354 - -
Vian7g01658 1154 Pfam XS domain 631 742 IPR005380 GO:0031047
Vian7g01658 1154 Pfam XS zinc finger domain 44 86 IPR005381 GO:0031047
Vian7g01658 1154 Pfam XS zinc finger domain 278 320 IPR005381 GO:0031047
Vian7g01658 1154 Pfam XS zinc finger domain 442 485 IPR005381 GO:0031047
Vian7g01658 1154 Pfam XS zinc finger domain 158 200 IPR005381 GO:0031047
Vian7g01658 1154 Pfam XS zinc finger domain 562 605 IPR005381 GO:0031047
Vian7g01658 1154 Coils Coil 906 950 - -
Vian7g01658 1154 Coils Coil 789 823 - -
Vian7g01658 1154 PANTHER RIBONUCLEASE P SUBUNIT P38 523 1152 IPR045177 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01658 Vian-Chr7 26023449 26032480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01658 - - gmx:100790814 1926.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01658 7 26023449 26032480 Vian7g01658 7 26023449 26032480 ECH
Vian2g02643 2 47220230 47224485 Vian7g01658 7 26023449 26032480 PCT