Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02643 ATGGCTCAAAGCAGCTCTGATGAGGATACTGATATTAGTGAATCTGAAATCAGTGAGTACGAAGATAAATCCTATGAAGAACTGAAAAGTGGAAGTCAGAATTTAAAAACATCGGATGAGACTTTCACTTGTCCGTATTGCCCTAAAAAGAGAAAACGGGATTATTTGTACAAGGAGCTCCTCCAACATGCTTCTGGGGTGGGTCAGAGTAGTTCGCAAAAGAGGAAAGCTAGAGACAAAGCTAATCATTTGGCTTTAGTGAAATATTTGGAAAATGATCTCATGAATGTAGATGTTCCATCAAATGATTCAAAACCGGAAGAAGAAAGTGATTCTTCTGTTAATTCTAATGATCAGTTTGTGTGGCCTTGGATTGGAGTTGTAGTTAATATTCCAACTAGACGGACAGAAGATGGACGTTGTGTTGGCGAGAGCGGTTCTAGGCTGAGGGATGAGTATAGAAGCAGGGGGTTCAATCCAGTTCGAGTCAATCCTTTGTGGAATTTCCGGGGTCACTCTGGAACTGCTCTTGTGGAGTTCAATAAAAGCTGGCCAGGCTTAGATAATGCAATGGCATTTGAAAGAGCATATGAATTAGATCATCATGGGAAAAAAGATTGGTTTGGTAATTGTGGGCAGAAGTCTGGTCTTTATGCATGGGTTGCCCGGGCGGATGACTACAAAATGAACAGCATTTATGGAGAATATCTGCGGAAAATGGGTGATGTCAAAACCATATCTGAGCTCATGGAAGAAGAAGCTCGAAGGCAAGATAAACTCGTATCCAATTTGAATAACATTATTCAGGTCAAGAACAAGCACATAAAAGAGATTGAAGTGAGATACCATGAAACTACACACAAAATGAACCTTGCTATGATGGAAAAAGATAATCTCATTCAATCTTACAATGAAGAGATACAGAAAATACAGTCAACTGCCAGGGATCACTTCCAGAAGATTTTTACTGATCACGAAAAGCTCAAAACGCAACTGGAGTCTCAGAAAAATGAGCTTGAGTTACGGAAAATTGAATTAGAAAAACGTGAGGCGCACAATGAAAGTGAAAGAAAAAAGTTGGCAGAAGAAATCGAGGAGAATGCAACAAAAAATAGTTCTCTTCAGATGGCTGCTATTGAGCAAAAGAAAGCAGATGAAAATGTTATGAAACTGGCTGAAGATCAAAAGAGGCAAAAAGAGCAACTCCATGCTAAAATCATTCAGCTTCAGAAACAACTCGATATGAAACAAGAACTGGAGTTGGAGATTCAGCAATTAAAAGGATCTTTAAGTGTATTGAAGCACATGGAAGATGACGAAGATGTTGAAATTCTGAAGAAAGTAGATAATTTACAAAAGGATTTAAGAGACAAGCAACTATCACTTCAAGACCTTGATCAACTTAATCAAGCACTAATAATTAAAGAGCGCGAGAGTAATGATGAGCTGCAGGAAGCTCGACAAGCATTGGTTGATGGAGTTAAAGAGTTACAACCTCTTGGAAATATTCGTTTGAAGAGAATGGGGGAACTTGACACAAGTCCATTCCTTGAGGCAATGAAGAAAAGATACAATGAAGAGGATGCTGAAGAGAGAGCTTCAGAACTGTGCTCGTTGTGGGAAGAGTATCTGAAGGACCCAGATTGGCATCCACTCAAAGTTATCATGGTTGATGGGAGAGAAAAGGAAATTATTAAAGATGACGATGAAAAGCTGAACGGGTTGAAAAATGACCTGGGTGAAGGCGCGTATAAAGCAGTGGTGGAGGCATTGTTAGAAATTAATGAACATAATCCTAGTGGCCGGTACTTAACCTCAGTATTATGGAACTACAAACAAGGAAGGAGAGCAACTCTTAAAGAAGGAGTGCAATTTCTGTTAAATTATTGGAAAAAACGCAAGAGGGGAACGACATGA 1917 0.3928 MAQSSSDEDTDISESEISEYEDKSYEELKSGSQNLKTSDETFTCPYCPKKRKRDYLYKELLQHASGVGQSSSQKRKARDKANHLALVKYLENDLMNVDVPSNDSKPEEESDSSVNSNDQFVWPWIGVVVNIPTRRTEDGRCVGESGSRLRDEYRSRGFNPVRVNPLWNFRGHSGTALVEFNKSWPGLDNAMAFERAYELDHHGKKDWFGNCGQKSGLYAWVARADDYKMNSIYGEYLRKMGDVKTISELMEEEARRQDKLVSNLNNIIQVKNKHIKEIEVRYHETTHKMNLAMMEKDNLIQSYNEEIQKIQSTARDHFQKIFTDHEKLKTQLESQKNELELRKIELEKREAHNESERKKLAEEIEENATKNSSLQMAAIEQKKADENVMKLAEDQKRQKEQLHAKIIQLQKQLDMKQELELEIQQLKGSLSVLKHMEDDEDVEILKKVDNLQKDLRDKQLSLQDLDQLNQALIIKERESNDELQEARQALVDGVKELQPLGNIRLKRMGELDTSPFLEAMKKRYNEEDAEERASELCSLWEEYLKDPDWHPLKVIMVDGREKEIIKDDDEKLNGLKNDLGEGAYKAVVEALLEINEHNPSGRYLTSVLWNYKQGRRATLKEGVQFLLNYWKKRKRGTT 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02643 638 MobiDBLite consensus disorder prediction 1 47 - -
Vian2g02643 638 CDD RRM_like_XS 120 227 IPR005380 GO:0031047
Vian2g02643 638 Pfam XS zinc finger domain 44 87 IPR005381 GO:0031047
Vian2g02643 638 Coils Coil 293 320 - -
Vian2g02643 638 Coils Coil 392 436 - -
Vian2g02643 638 PANTHER RIBONUCLEASE P SUBUNIT P38 5 635 IPR045177 GO:0080188
Vian2g02643 638 Coils Coil 322 366 - -
Vian2g02643 638 MobiDBLite consensus disorder prediction 96 116 - -
Vian2g02643 638 Pfam XH domain 506 635 IPR005379 -
Vian2g02643 638 Gene3D XS domain 112 282 IPR038588 -
Vian2g02643 638 Pfam XS domain 118 228 IPR005380 GO:0031047
Vian2g02643 638 Coils Coil 448 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02643 Vian-Chr2 47220230 47224485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02643 - - gmx:102665742 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02643 2 47220230 47224485 Vian2g02643 2 47220230 47224485 ECH
Vian2g02643 2 47220230 47224485 Vian7g01658 7 26023449 26032480 PCT