Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01633 ATGGGCATGAATAATGGCGAGGGAAGTGGAGGAGGGGCATTGCAGAGGGTGCTTTACATGTGGGGTTACCTTCCCGGAGCTCTGCCGCAGAGGACGCCGCTCTTGACTCCCGTCGCCGTTAGGTTTCCGTCATGTAGTCACTCTTGGAATGATGTTTGCGGCGGTGGTTGTGGATTCGCTATTGCTATCTCTGAATCAGGGAAGCTCATCACGTGGGGCTCGACAGATGATTTAGGCCAAAGCTATGTGACTTCTGGCAAGCACGGGGAAACTCCAGAGCCTTTCCCTCTTCCAACCGAAGCATCTATTGTGAAAGCTGCAGCAGGGTGGGCTCATTGTGTTGCTGTAACAGAACATGGAGAAGTTTATACATGGGGATGGAAAGAATGTATTCCCTCAGGGAGGGTATTTGGTGAACCATCGACAGGGGTAGGTCTTGAAAAGGATGTGCCAGGAAGTCATAGTCAATTATCAACAGAGCAAGGTATGTTTGACCTCTTTAGAACAACAGCTTATGTACAGCTAGCTGTCCCTCCCAAGGAGTGGTCTACGCAAGCCAAGAGTTGTTTTGCAATAGTGAGCCCTCGTTCACAAGGCTCAAGATCTACTGGAGGTACTGCCTCCAATAACAGTGGAGAAGAAAGTACAAAGCGAAGGAGAGTATCTGCAACAAAGCAAACAGCTGAAAGCTCATCATCCAGCGATGATAATCTAACTGCGTTTCCGTGTCTTGTCACACTAAATCCAGGAATAAGGATAGCTAGTGTTGCTGCCGGTGGACGCCATACACTTGCATTGTCAGATACAGGACTGGTGTGGGCTTGGGGTTATGGAGGTGAAGGGCAGCTTGGTTTGGGTTCAAGAATACGTATGGTATCCTCTCCTCATCTCGTTCCATGTATTGATTCCTCTTATTATGGTAAAGATAGATCTGCTACACTGGTTCGAGGAAGCATGGGTTCAGAGGGACAGAGTTTTAGAGTTCCTGGAAGTTACATAAAGAGAATTGCCTGTGGAGGTCGACATAGTGCAGTCATTACAGATGCTGGAGCCTTGCTTACTTTTGGTTGGGGACTCTATGGACAGGTTATTGATGTAATGGGTAAAGTAGAATATGGTGGACAAAAGCAAGTAGATGTTGAAGATGTGTGTGGGCAAGGAAGTACCGATGATGAACTAAGCCCAACTTGTGTATCTTCCTTATTGGGTATCCACATAGAGGGGGTTGCTGCAGGACTGTGGCATACAGTCTGTACATCTGCTGATGGTGATGTGTATGCATTTGGTGGTAATCAGTTTGGACAGCTAGGTACTGGTGCCGATCAAGCTGAGAGGGTGGAAGAGTTTTCTGCTGGGGATGGAACAAATATGGACAGACTTGTGCTGCTGGGCCTTGGGGACGTGATTGACCGTAACGTTCCTTCTGAAGTCACCATTGAAGGTTGTGTTCCTAAAAATGTTGCTTGTGGTTGGTGGCATACTCTTCTTCTGGCCGAGTCCCCCACCTGA 1509 0.4798 MGMNNGEGSGGGALQRVLYMWGYLPGALPQRTPLLTPVAVRFPSCSHSWNDVCGGGCGFAIAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTEHGEVYTWGWKECIPSGRVFGEPSTGVGLEKDVPGSHSQLSTEQGMFDLFRTTAYVQLAVPPKEWSTQAKSCFAIVSPRSQGSRSTGGTASNNSGEESTKRRRVSATKQTAESSSSSDDNLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSSPHLVPCIDSSYYGKDRSATLVRGSMGSEGQSFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQVIDVMGKVEYGGQKQVDVEDVCGQGSTDDELSPTCVSSLLGIHIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGADQAERVEEFSAGDGTNMDRLVLLGLGDVIDRNVPSEVTIEGCVPKNVACGWWHTLLLAESPT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01633 502 MobiDBLite consensus disorder prediction 195 212 - -
Vian7g01633 502 SUPERFAMILY RCC1/BLIP-II 19 500 IPR009091 -
Vian7g01633 502 Pfam Regulator of chromosome condensation (RCC1) repeat 103 127 - -
Vian7g01633 502 Pfam Regulator of chromosome condensation (RCC1) repeat 333 362 - -
Vian7g01633 502 Pfam Regulator of chromosome condensation (RCC1) repeat 408 435 - -
Vian7g01633 502 Pfam Regulator of chromosome condensation (RCC1) repeat 253 282 - -
Vian7g01633 502 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 336 346 IPR000408 -
Vian7g01633 502 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 423 500 IPR000408 -
Vian7g01633 502 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 270 349 IPR000408 -
Vian7g01633 502 PRINTS Chromosome condensation regulator RCC1 signature 409 425 IPR000408 -
Vian7g01633 502 PRINTS Chromosome condensation regulator RCC1 signature 425 439 IPR000408 -
Vian7g01633 502 PRINTS Chromosome condensation regulator RCC1 signature 271 287 IPR000408 -
Vian7g01633 502 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 256 266 IPR000408 -
Vian7g01633 502 Gene3D - 142 502 IPR009091 -
Vian7g01633 502 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 67 119 IPR000408 -
Vian7g01633 502 MobiDBLite consensus disorder prediction 195 236 - -
Vian7g01633 502 Gene3D - 9 139 IPR009091 -
Vian7g01633 502 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 58 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01633 Vian-Chr7 25593745 25598817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01633 - - gmx:100807837 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02611 2 46817685 46822919 Vian7g01633 7 25593745 25598817 ECH
Vian7g01633 7 25593745 25598817 Vian7g01633 7 25593745 25598817 ECH
Vian2g02611 2 46817685 46822919 Vian7g01633 7 25593745 25598817 PCT