Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01614 ATGTCATGTGATGTGGCACTTCACACTTCAAATTTGGAAAACACAGAGAGAGAAAGAGAGAGAGCAAGAAACCATAACAACTGTTCAGTAACACAAACCTTTTCCCCAAAAGCTAACGTTGTTCTTCATTTCATCGTCTTTTCCACGGTGCTGTGTCCACAGCAACCTCAACGAAACTGTTACTGTCGCTGTGTTGGGACATGCTGGAGGAGAGTGAGCCATCACTGGAGTGATTTTCATTCAAAAAGCAAGGCTTTTCTGCTGGGGGAAAGTTGTTCAAGATGGAGGCTTTATGCAACAGGGATGAAAATTTTCAGAAGAAAAAAAGACGGGCTTCCTTCTTCTGCCACTGATTCGACTCAAGAGCTCAAAGGATGTGCTTCTCCCCCTCTTGGTTGGCCTATTCGGAAGGCTACATTCTCCAAATGCCGCAAATCAGATGAGAAAGAAAATGAACCTGTTACTCACTTGGAAGACACGAAATTTACCAGCATCAGTTCAAAAATGCCAGGAATCGATGCAATGAAAGAAAAGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGGAAAGGAGTCTGCAGTGCTTTGGCTATCTCAAATGCCATTACAAATCTGTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTGTTCCGTGTGAAAAGAAAGAAATGTGGCGGAGGGAGATGGAATGGCTTGTAAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAGACATTTCCGGATGGAAGTAAGCTAGAGGTAATGACTTGCAGACCAAGGTCAGATCTTTTTATGAATCTTCCAGCTCTGCGCAAACTCGACAACATGCTTCTTGAAATTTTAGATGGTTGCAAAGATATGGAATTTTGGTATGTTGACCAAGGAATTGTAGCCCAAGATGCAGAGGGTTCAGCTTCATTTTGCAAAAGAATTCAGAGACAAGAGGATAAGTGGTGGCTCCCTGTACCTCGTGTGCCTCCTGCTGGCCTCAGTGAGAACTCGAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATTCTAAAAGCTGCCATGGCTATCAACAATGGTGCTTTAGCTGAAATGGAAGTTCCTGAGTCATACTTGGAAACTCTTCCCAAGTTCTCTGCTGACTTATATGACCTTGCGGTGAAACTTAAATTGGTTTTCACAAAGGGTTTTTCTAACATAGTTGATTCATTGTTAAACTTTCAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCATTACATTACATCAGAGAAATTCTCTCCAGAGTGTCTGCTGGATTGCCTAGACCTCTCCTCGGAGCATGTGGCACTAGAGATTGCAAACCGTGTTGAAGCCTCAATATATGTGTGGCGTAGAAGAGCTCACTCTAAACCCCCACCTAATCCTAACCGTTCAACTACAAAGTCATCGTGGGAAATTGTGAAGGACTTCATGGCTGATGGAGACAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTTCTAGTTTCATTGAAGCAGAAGTATCCTGGTCTAACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATACTTGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGCATAGACGATTTGCTATATGTGGATGACTTGACTAAACATTCAGATAGGTTTCCATTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCACAAAGCAGTTGGCACACCAAGCTTTTCACCTGCTCCATCACTCATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTCAACAACAACATTAACAATAACAACAACAACAACAACATCAAACCTCAACGTCGTGGCTTTGGGGTGAGAAGAGTATTGTCGAATTATCTTGGTGCAGAATCAAAAGAAACAAAGAATTTTAGCAGTTCAACTGTTGTGGTGAATGGTTCTAACCCAAGCTGCAATAAAAGAGAACAGGCAGAACATCACAAGAAGCCACATGCCATGAATGGCAAGACAAAATGA 2067 0.4253 MSCDVALHTSNLENTERERERARNHNNCSVTQTFSPKANVVLHFIVFSTVLCPQQPQRNCYCRCVGTCWRRVSHHWSDFHSKSKAFLLGESCSRWRLYATGMKIFRRKKDGLPSSATDSTQELKGCASPPLGWPIRKATFSKCRKSDEKENEPVTHLEDTKFTSISSKMPGIDAMKEKFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPVPCEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDGCKDMEFWYVDQGIVAQDAEGSASFCKRIQRQEDKWWLPVPRVPPAGLSENSRKQLNHTRECASQILKAAMAINNGALAEMEVPESYLETLPKFSADLYDLAVKLKLVFTKGFSNIVDSLLNFQNGRTCLGDFVYHYITSEKFSPECLLDCLDLSSEHVALEIANRVEASIYVWRRRAHSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLVSLKQKYPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAVGTPSFSPAPSLISPARGERSPFLNNNINNNNNNNNIKPQRRGFGVRRVLSNYLGAESKETKNFSSSTVVVNGSNPSCNKREQAEHHKKPHAMNGKTK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01614 688 ProSiteProfiles PRONE domain profile. 162 575 IPR005512 GO:0005085
Vian7g01614 688 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 122 619 IPR038937 GO:0005085
Vian7g01614 688 MobiDBLite consensus disorder prediction 651 669 - -
Vian7g01614 688 FunFam Rop guanine nucleotide exchange factor 14 435 574 - -
Vian7g01614 688 Coils Coil 5 25 - -
Vian7g01614 688 Gene3D PRONE domain, subdomain 2 414 531 - -
Vian7g01614 688 Gene3D PRONE domain, subdomain 1 165 395 - -
Vian7g01614 688 Gene3D PRONE domain, subdomain 1 532 567 - -
Vian7g01614 688 FunFam Rop guanine nucleotide exchange factor 14 164 397 - -
Vian7g01614 688 MobiDBLite consensus disorder prediction 651 688 - -
Vian7g01614 688 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 414 569 IPR005512 GO:0005085
Vian7g01614 688 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 172 385 IPR005512 GO:0005085
Vian7g01614 688 MobiDBLite consensus disorder prediction 1 23 - -
Vian7g01614 688 FunFam Rop guanine nucleotide exchange factor 7 401 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01614 Vian-Chr7 25261531 25264624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01614 - - gmx:100814278 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02598 2 46689832 46692854 Vian7g01614 7 25261531 25264624 ECH
Vian7g01614 7 25261531 25264624 Vian7g01614 7 25261531 25264624 ECH
Vian2g02598 2 46689832 46692854 Vian7g01614 7 25261531 25264624 PCT