Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01602 ATGGAGCTGTTAATTGGATTAATGGCACTTGATGAAGATAGACCTGAGGAAAGCCAGTACTTGGCATCGTGGTTCTGGCATGTAAAATCAGACAAGGAGAAACTAATGACTGCTGTTGACCCTGCCCTTGACATAAAGGAAGAGATGTTCGATATTGTCTCCATCATTGCCGAGTTAGCTGGGCACTGCACTGCCAGGGAACCAAACCAAAGGCCAGATATGAGTCATGTTGTGAATGTGAGTAGTGAGGACGGAAGGTTCTCAGATCCACGCTCTCTCCATCACAGAATGAAGGGTGGGAGCCGTTTCTTCACCATAGCTCTGGTCTCCGCCTGGTACGCCACCAACATTGGGGTTTTGCTCCTTAACAAGTACCTTCTCAGTAACTATGGCTTCAAGTACCCTATATTCCTCACCATGTGCCACATGACCGCTTGTTCCCTCTTCAGCTACGTCGCCATCGCCTGGCTCAGGCTCGTTCCCATGCAGACCATACGCTCCCGCCTCCAGTTCCTCAAGATCGCCGCTCTCAGCCTCGTCTTCTGCGTCTCCGTCGTCTTCGGCAACGTCTCCCTCCGCTACCTCCCCGTCTCCTTCAACCAGGCCATCGGCGCCACCACTCCCTTCTTCACCGCCGTTTTCGCCTATCTCATCACCTTCAAGAGAGAGGCCTGGCTCACCTACCTCACCCTCGTCCCCGTCGTCGCCGGCGTCGTCATTGCCAGCGGGAGTGAACCGAGCTTCCATTTATTTGGATTCATAGTATGTGTTGCAGCTACAGCTGCCCGAGCCTTAAAATCAGTGTTGCAAGGAATTTTACTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTTCTTTATATGGCTCCAATTGCTGTTGTTTTCCTTCTCCCTGCCACACTACTGATGGAAGAAAATGTGATTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCTTATCTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTGCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTATTCATTCACAGTCCTTGGAGTAGTACTCTATAGTGAAGCCAAAAAGCGAAGCAAGTGA 1209 0.4888 MELLIGLMALDEDRPEESQYLASWFWHVKSDKEKLMTAVDPALDIKEEMFDIVSIIAELAGHCTAREPNQRPDMSHVVNVSSEDGRFSDPRSLHHRMKGGSRFFTIALVSAWYATNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLRLVPMQTIRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTYLTLVPVVAGVVIASGSEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLLMEENVIGITLALARDDVKIIWYLLFNSALAYLVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSFTVLGVVLYSEAKKRSK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01602 402 Pfam Triose-phosphate Transporter family 107 395 IPR004853 -
Vian7g01602 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 244 - -
Vian7g01602 402 PANTHER SOLUTE CARRIER FAMILY 35 106 399 - -
Vian7g01602 402 Gene3D Transferase(Phosphotransferase) domain 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01602 Vian-Chr7 25051304 25058383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01602 96 402 Organic Solute Cotransporters AT3G11320 88.925 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01602 - - gmx:100806704 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02587 2 46570553 46572812 Vian7g01602 7 25051304 25058383 ECH
Vian7g01602 7 25051304 25058383 Vian7g01602 7 25051304 25058383 ECH
Vian2g02587 2 46570553 46572812 Vian7g01602 7 25051304 25058383 PCT