Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02587 ATGAAGAGTTCCAACCGGTTCTTCACTGTAGCGCTGGTGGCGGCGTGGTACTCCTCCAACATTGGGGTGCTTCTCTTGAATAAGTATTTGCTCAGCAACTATGGGTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACGGCGTGTTCCTTGTTCAGTTACGTGGCTATCGCGTGGATGAAGCTAGTGCCGTTGCAAACCATTCGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTCTAAGTCTTGTTTTCTGTGTCTCCGTTGTGTTTGGGAACATTTCTCTGCGCTACCTCCCCGTATCGTTTAACCAGGCTATTGGCGCCACCACGCCCTTCTTCACTGCCGTTTTTGCTTACCTTATGACCTTCAAGAGGGAGGCTTGGCTCACGTACCTCACCCTTGTTCCTGTTGTTACTGGAGTTATCATTGCCAGTGGGGGGGAACCTAGTTTCCATCTGTTTGGATTTATTATATGTGTTGCGGCTACGGGTGCAAGGGCTCTGAAATCAGTGCTGCAAGGGATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTTTGCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCAACGCTTATAATGGAAGACAATGTGGTTGGCATCACGTTGGCTCTTGCTAGAGATGATTCCAAGATCATTTGGTATCTGCTGTTTAATTCGTCTCTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACGAAACATACAAGTGCTCTGACCCTTCAGGTTCTAGGAAATGCTAAAGGTGCTGTAGCAGTAGTAGTTTCAATTCTAATCTTCAGAAACCCAGTTTCGGTCACTGGAATGATGGGTTACTCACTCACAGTGTTTGGAGTTATACTCTATAGTGAAGCCAAGAAGCGAAGCAAGTAA 921 0.4625 MKSSNRFFTVALVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKLVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATGARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEDNVVGITLALARDDSKIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVFGVILYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02587 306 Pfam Triose-phosphate Transporter family 11 299 IPR004853 -
Vian2g02587 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
Vian2g02587 306 PANTHER SOLUTE CARRIER FAMILY 35 11 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02587 Vian-Chr2 46570553 46572812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02587 1 306 Organic Solute Cotransporters AT3G11320 90.196 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02587 - - vra:106757848 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02587 2 46570553 46572812 Vian7g01602 7 25051304 25058383 ECH
Vian2g02587 2 46570553 46572812 Vian2g02587 2 46570553 46572812 ECH
Vian2g02587 2 46570553 46572812 Vian7g01602 7 25051304 25058383 PCT