Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01586 ATGGTTGATCTAGATTGGCAAACAAAGATGGTTTGTTCCAACATGCCTCCCAACTCACCCAAACTCTCTCTCTTAGACAACAACATCCCAATCCCAATCCCAATCCCTACTTTGCAAATCCCCCTTCGTCAAAACGACATCACCGCTGCCTCCTCCCCGCTTTGTGCTGCCTACGACAACTACCTTCGCCTCCCCGACCTCAGAAATCTTTGGGCCTCCAACAACTTCCCCGATTGGTCCAACGAGCCCATCATAAAGCCCGCCTTACACGCCCTCGAAATCACCTTCCGCTTTCTCGCAACCGTTTTATCAGACCCGAGGCCCTACGTTAACAAGCGCGAGTGGACCCGACGCCTGGAGTCTCTCGCCGCGGCGCAGGTCCAGATCATTGCCGTGCTCTGCGAAGACGAGGAGCAAAACCCCCAGACACGTGGCACGGCACCCGTGAGTGACGTCAACGACTTCGTCACGAGTCAGAGAAGAAGCTACAGCGAGGAGAGCTTGCTCCCGCGTCTCGCCACGTGGCACAGATCCAGGGACGTGGCCAGGAGGATCCTCGCCACCGTGGAATGCGAGATGATGAGGTGCACGTACACGCTGGGTCTCGGAGAGGCCAATCTCGCGGGAAAAAAGGTTCTCCATTACGACGACGTTTGCAGGCCGACCGAGATCCGATCCCTGGAGACCACGCCGTACGATCACGTGGAGAACTACGAGAACAGGACGGTGCACGCGGCGCAGCAGATCGTGGAGTGCTGGACGCGTGCGGGGAGGAGGTTGGTGGAGAGATTGGTGGAGTCGGTGGAGAGGAGAGAGTTGGAGAAGGCGGCGAGTGAGTGCCACGCGGTGGAACGGATCTGGAAGCTTCTGGCGGAGGTTGAGGACGTGCATGTGATGATGGATCCGGAGGATTTTCTTCGGCTGAAGAAGGAGTTGGGGATGGGAAGGCAGGGCGAAACGGCGGCGTTTTGCTTTAGGTCGAAGGAGGTTGTGGAGTTGGCGAGGGTGTGTAGGGATCTGAGGCAGAAGGTGCCGGAGATATTGGAGGTGGAGGTTGACCCGAAGGGTGGGCCAGGGATGATGGAGGCGGCGATGAAGATATTCCTTCAACCCACCTATTTCCCTAGCTTGGATGCTGCCAAGACATTCCTCAGTTATTACTGGGAAAACAACGCCAATAATCAAACTCAAAATTTGGTAGTTCCTTGGTAG 1212 0.5644 MVDLDWQTKMVCSNMPPNSPKLSLLDNNIPIPIPIPTLQIPLRQNDITAASSPLCAAYDNYLRLPDLRNLWASNNFPDWSNEPIIKPALHALEITFRFLATVLSDPRPYVNKREWTRRLESLAAAQVQIIAVLCEDEEQNPQTRGTAPVSDVNDFVTSQRRSYSEESLLPRLATWHRSRDVARRILATVECEMMRCTYTLGLGEANLAGKKVLHYDDVCRPTEIRSLETTPYDHVENYENRTVHAAQQIVECWTRAGRRLVERLVESVERRELEKAASECHAVERIWKLLAEVEDVHVMMDPEDFLRLKKELGMGRQGETAAFCFRSKEVVELARVCRDLRQKVPEILEVEVDPKGGPGMMEAAMKIFLQPTYFPSLDAAKTFLSYYWENNANNQTQNLVVPW 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01586 403 Pfam Hs1pro-1 N-terminus 1 190 IPR009869 GO:0006952
Vian7g01586 403 Gene3D - 213 329 - -
Vian7g01586 403 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 371 IPR037217 GO:0019441|GO:0020037|GO:0046872
Vian7g01586 403 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 368 IPR038759 -
Vian7g01586 403 Pfam Hs1pro-1 protein C-terminus 193 368 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01586 Vian-Chr7 24834953 24836314 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01586 - - gmx:100778560 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01586 7 24834953 24836314 Vian7g01586 7 24834953 24836314 ECH
Vian2g02983 2 50471968 50473332 Vian7g01586 7 24834953 24836314 PCT