Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02983 ATGGTTGATTTACATTGGAAATCAAAGATACCTGCTTCCGACATGTCTTCCAAATCTCCAAAACTCTCCCTCCCCGCCAACTCCTTACCCTCTCTGCAACTACCCTTCCGCACCACAGACATCTCTTCCGCTCCACCTGCACTCTGTGCTGCATACGATTACTACCTCTCTCTTCCACAACTCAGAACCCTTTGGAATTCAAGAGACTTTCCCAATTGGAACAACGAACCCGTTTTAAAACCTGCCCTGCAAGCTTTGGAAGTCACCTTCCGTTTTCTTTCCATTGTATTCTCCGATCCCAGGCCTCATTCCAACCGCAGGGAATGGAACCGTGTGATAGAGTCCCTCGCCATTCATCAGATTGAGATCATAGCCATGCTGTGCGAAGACGAGGAGCTCAATTCTCAGACACGTGGCAGCGTCCCAACCGCTGATCTCACTGTAGATAACACCAACAGCGAGAGCCGAAGCTACAGCGAGGCCAGCCTTCTTCCTCGGCTTGCCACGTGGTACAAATCCAAGGACGTGGCGCAGAGGATTCTTCTCACCGTTGAGTGCCAAATGAGGAGGTGTAGCTATACGCTAGGTTTGGGAGAGCCGAACCTGGCGGCGAAACCGAGCCTGCTCTACGACCGCGTCTGCAGACCGAGTGAAATCCACGCGCTCAAGACTACGCCTTACGACGAACGCGTGGAGAACTACGAGAACCACGCTGTGCACGCCACGCATCAGATCGCGGAGTCGTGGATCCACACATCGCGGAAGCTTCTGGAGAGGATCGCCGACGCTATCCACTCCAAAAGGTTGGAGCAGGCGGCGGAGGACTGCCACGCAGTGGAGCGCATCTGGAAGCTTCTCGCGGAGGTGGAGGATCTTCACCTGATGATGGATCCGGACGAATTCCTGCGTTTGAAGAACCAGCTCTCGGTGCGCTCCTCGAGCGGCGAAACGGCGTCTTTCTGCTTCAGGTCAAAGGAATTGGTGGAAGTGACGAAAATGTGCAGAGATCTGAGGCACATGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCGAAGGGAGGACCGAGAATTCAAGAAGCGGCGATGAAACTGTACGTCTCGAAGAGCGCGTTCGAGAAGGTTCATCTGTTGCAGGCTATGCAGGCGATTGAGGCGGCGATGAAGAGGTTCTTCTACGCGTATAAACAAGTCCTGACGGTGGTGATGGGAAGCTCGGAGGCTAACGGCAACCGAGTTGGACTGAGTTGCGACTCGGCTGACTCGTTGACTCAGATATTCCTTAAACCGACGTATTTTCCAAGCTTGGATGCCGCCAAGACTTTCCTTGGGTACCTCTGGGATAATAACGATTACAAGTGGCCATAA 1365 0.5348 MVDLHWKSKIPASDMSSKSPKLSLPANSLPSLQLPFRTTDISSAPPALCAAYDYYLSLPQLRTLWNSRDFPNWNNEPVLKPALQALEVTFRFLSIVFSDPRPHSNRREWNRVIESLAIHQIEIIAMLCEDEELNSQTRGSVPTADLTVDNTNSESRSYSEASLLPRLATWYKSKDVAQRILLTVECQMRRCSYTLGLGEPNLAAKPSLLYDRVCRPSEIHALKTTPYDERVENYENHAVHATHQIAESWIHTSRKLLERIADAIHSKRLEQAAEDCHAVERIWKLLAEVEDLHLMMDPDEFLRLKNQLSVRSSSGETASFCFRSKELVEVTKMCRDLRHMVPEILEVEVDPKGGPRIQEAAMKLYVSKSAFEKVHLLQAMQAIEAAMKRFFYAYKQVLTVVMGSSEANGNRVGLSCDSADSLTQIFLKPTYFPSLDAAKTFLGYLWDNNDYKWP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02983 454 MobiDBLite consensus disorder prediction 1 21 - -
Vian2g02983 454 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 210 442 IPR037217 GO:0019441|GO:0020037|GO:0046872
Vian2g02983 454 Pfam Hs1pro-1 N-terminus 1 185 IPR009869 GO:0006952
Vian2g02983 454 Gene3D - 208 341 - -
Vian2g02983 454 Pfam Hs1pro-1 protein C-terminus 188 448 IPR009743 -
Vian2g02983 454 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 450 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02983 Vian-Chr2 50471968 50473332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02983 - - gmx:547603 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02983 2 50471968 50473332 Vian2g02983 2 50471968 50473332 ECH
Vian2g02983 2 50471968 50473332 Vian7g01586 7 24834953 24836314 PCT