Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01583 ATGTTACCCCAGAAGCAAGGTGAAGAAATCATGATGTCAAGCCTGAATGAAACTGTTGAGCGTGAAGAGAGAGAGGATGAGAAGGTGGGTGGCTCACATTCCAGTTTGAGAAGCATTCTGTGGCACGGTGGATCTGTTTATGATGCATGGTTCAGCTGTGCTTCGAATCAGGTTGCGCAGGTTCTGCTAACACTGCCATACTCTTTCGCTCAGCTGGGAATGCTTTCTGGCGTCATATTCCAGGTCTTCTATGGAATAATGGGAAGTTGGACTGCTTATTTGATTAGCATTCTGTACATCGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAACTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTACTAGGTCCATATTGGAAAGCCATTGGCCTGGCCTTTAACTGCACTTTTCTCCTCTTCGGATCTGTCATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAATGACCACTTGGATAAGAGGACCTGGACTTACATATTCGGAGCATGCTGTGCAACAACGGTGTTCATACCTTCATTTCACAACTACAGGATTTGGTCTTTCCTTGGTCTTGGCATGACCACTTACACAGCCTGGTACTTAACCATTGCAGCCATCCTTCATGGCCAGGTTGAAAATGTGACTCACACGGGCCCCAAAAAATTGGTTTTGTATTTCACGGGAGCCACCAACGTTCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATATATCTATCTTTATGCCACTCTTTTTGTATTCACACTCACCCTACCATCTGCCATTGCCGTTTACTGGGCCTTTGGTGACCAACTCCTGGACCACTCCAATGCCTTCTCTCTTCTCCCTCGCTCTGGTTGGCGTGACACAGGTGTCATCTTAATGCTGATTCACCAGTTTATCACTTTTGGATTTGCTTGCACACCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCTCTTGCAAGGTTGCCTGTGGTGATACCAATATGGTTTTTGGCCATTATTTTCCCTTTCTTTGGCCCTATAAACTCTGCTGTGGGGGCTCTTTTGGTTACCTTTACCGTCTATATCATCCCTGCTTCTGCCCACATGCTTACTTACAGGTCTGCTTCTGCACGACAGAATGCTGCTGAGAAATTGCCCTTCTTCATCCCAAGCTGGACGTTAATGTATGTGATCAATGCATTTGTGGTGGTATGGGTTCTAGTGGTGGGATTTGGATTTGGAGGGTGGGCTAGCATGGCAAACTTCATCAAACAGGTTGACACATTTGGACTCTTTGCAAAGTGCTACCAGTGCCCCCCGCATAAAACACCAGCTTCCAACCAAACACTGCATCACTGA 1440 0.4556 MLPQKQGEEIMMSSLNETVEREEREDEKVGGSHSSLRSILWHGGSVYDAWFSCASNQVAQVLLTLPYSFAQLGMLSGVIFQVFYGIMGSWTAYLISILYIEYRSRKEKENVNFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAILHGQVENVTHTGPKKLVLYFTGATNVLYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPASAHMLTYRSASARQNAAEKLPFFIPSWTLMYVINAFVVVWVLVVGFGFGGWASMANFIKQVDTFGLFAKCYQCPPHKTPASNQTLHH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01583 479 PANTHER OS05G0424000 PROTEIN-RELATED 48 426 - -
Vian7g01583 479 Coils Coil 5 25 - -
Vian7g01583 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01583 Vian-Chr7 24789473 24793229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01583 22 465 Organic Solute Cotransporters AT2G21050 79.730 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01583 K13946 - gmx:100817572 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02985 2 50496382 50500077 Vian7g01583 7 24789473 24793229 ECH
Vian7g01583 7 24789473 24793229 Vian7g01583 7 24789473 24793229 ECH
Vian2g02985 2 50496382 50500077 Vian7g01583 7 24789473 24793229 PCT