Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02985 ATGCAGAAAAAAAAAGATCACACTATAAAGAGAAGGCCAAGCCAAACCAAAGACTGTGACAAATATCTCCATTCTCCAACTCCAAGAGTTCAGCTCAACTTTCCTGACCTCAACTTTTTCATTTCCTATAATTTAATAAACAGGAGCTGTTTCTTGCTCGCTGGGTTTCCGCTATCTACATGCATTGAAATTGCTACTACACTAGCTGCTTCTTCTGCCAATTTCTCCGCATTTAACACCCTGAACTCAAAAGATTGGAAAAAGATGTCGCGCCAGAAGCAAGGAGAAGAAGCCATGATGTCGAGTCTCAACCAAACTGTCGAGCGTGAGGAGGGAGAGGAAGTCAAAGGGGAGACGTCACATTTTACCTTAAAAAATGCTTTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTAAACATGAGTCAGGAGAATGTGATACGATTTGCAGATAACTATTCTCAGGTTGCCCAGGTTCTGTTGACTCTGCCTTACTCTTTCGCACAGCTAGGGGTGGTTTCAGGCGTTGTATTCCAAGTGTTCTATGGCTTGCTGGGGAGTTATACTGCTTATTTAATTAGTACTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTTAATATATACTACATCAATGATCACATGGACAAGAGGACTTGGACCTACATATTCGGGGCTTGTTGTGCCACCACAGTGTTCATTCCATCATTTCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACGTACACTGCTTGGTATTTGACCATCGCATCACTTGTTCATGGTCAGGTTGAAAATGTGACACATTCGGGCCCAAAAAAGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATATATCTGTATGCAACATTTTATGTGTTCACCCTCACTATCCCCTCTGCGGTTTCCGTGTACTGGGCATTCGGAGATCAACTTTTGAATCACTCCAATGCCTTCTCACTTCTCCCGCGTACTGGCTGGCGTGACGCTGGTGTCATCCTAATGCTCATTCACCAGATTATCACATTTGGCTTTGCTTGTACGCCATTGTATTTTGTGTGGGAAAAAGTGATAGGGATGCATGACACAAAGAGCATATGCTTGAGGGCTCTAGCAAGGTTGCCTGTGGTCATACCGATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGGCCCATTAATTCAGCTGTGGGGGCTCTTTTGGTGAGCTTCACCGTTTACATCATTCCCGCTTCGGCCCATATGCTCACCTTCAGATCTGCTGCGGCAAGACAGAATGCTGCGGAGAAATTGCCCTTTTTCATTCCAAACTGGACATTGATGTACGTGGTGAATGCATTGGTTGTGGTGTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGATGGGCTAGCATGGTAAATTTCATCAAACAGGTTGACACATTCGGACTATTTGCCAAGTGCTACCAGTGCCCGCCCAAACTCACCAACCATACCCTCCATCACTCATAA 1647 0.4499 MQKKKDHTIKRRPSQTKDCDKYLHSPTPRVQLNFPDLNFFISYNLINRSCFLLAGFPLSTCIEIATTLAASSANFSAFNTLNSKDWKKMSRQKQGEEAMMSSLNQTVEREEGEEVKGETSHFTLKNAFWHGGSAYDAWFSCASNQVNMSQENVIRFADNYSQVAQVLLTLPYSFAQLGVVSGVVFQVFYGLLGSYTAYLISTLYIEYRSRKEKENVSFKNHVIQWFEVNIYYINDHMDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASLVHGQVENVTHSGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATFYVFTLTIPSAVSVYWAFGDQLLNHSNAFSLLPRTGWRDAGVILMLIHQIITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFRSAAARQNAAEKLPFFIPNWTLMYVVNALVVVWVLVVGFGFGGWASMVNFIKQVDTFGLFAKCYQCPPKLTNHTLHHS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02985 548 MobiDBLite consensus disorder prediction 1 22 - -
Vian2g02985 548 PANTHER OS05G0424000 PROTEIN-RELATED 156 497 - -
Vian2g02985 548 Pfam Transmembrane amino acid transporter protein 235 506 IPR013057 -
Vian2g02985 548 Pfam Transmembrane amino acid transporter protein 162 226 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02985 Vian-Chr2 50496382 50500077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02985 92 536 Organic Solute Cotransporters AT2G21050 67.015 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02985 K13946 - gmx:100795466 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02985 2 50496382 50500077 Vian2g02985 2 50496382 50500077 ECH
Vian2g02985 2 50496382 50500077 Vian7g01583 7 24789473 24793229 ECH
Vian2g02985 2 50496382 50500077 Vian7g01583 7 24789473 24793229 PCT