Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01569 ATGGATGAACACAACAAGAAAGTTGAAGTGAACTCGGAATCCACACGCACAAATTCACACTCTCTCGCATATATTTGCGTGGGTAGTGAAAGAGAACAGAGAAGAGAAAGGGAGCAAGTGATGTCGAAGCAGACATACAGCGTGTGCTTCTGCTGGCGCCGGCGGTTTAAGCTGGCCCTGGCGGAGGCGCCGTTGGAGATCAAGACCCTCTTCGAGGAGTACTCTGAGAATGAGATCATGACACCTTCGCATCTGAAAAGGTTCCTTGTTGAAGTGCAAAAGCAAGAGAAGGCCACTGAAGAAGAGGCGCAAGCCATCATTGACAGCTTCAGGCATTTCCATCGCAGAGGGGTTGGCCTCAATCTCGAATCTTTCTTCAAGTACCTCTTCAGTGATGACAACCCCCCTCTTCTTCCTTCTCATGGGGTGCACCATGATATGACTTTACCCTTGTCACATTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGCGAGTGCAGTGACGTGCCCATCATAAATGCACTGAAGAGAGGTGTGAGGGTGATTGAATTGGACATATGGCCTAATGCAGCAAAGGATAATATAAATGTTCTTCATGGAAATACATTGACTCCTCCTGTAGAGCTCATCAGATGTTTGAGATCTATTAAAGAATATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACAACGGATCTTCAGGCTAAAGTGGCTGAGATGGTTACAAACACTTTTGGAGATATACTATTTACTCCTAACACCGAAAGCGTGAAGGAGTTCCCTTCTCCTGATTCTCTTAAAAGGAGGATTATTATATCAACAAAACCACCTAAGGAGTATCTTGGGGCAAAAGAAAAGGATAAAGGGAATGATTCACAGCATGAAAAGGGAAAGGAGGATGGAAAGGCTTCAGGCGAGGATGAAGCTTGGGGAAAGGAAGTCCCTAGCTTGAGAGGTGGTACTATAGAGGATTACAAGGACGAATCTGATGAATCAGTTAAGTTAGCACATAATGAAGCTCCAGAATATAGACGCCTAATTGCCATTCATGCTGGAAAGCCTAAAGGTGGATTAGAGGAATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAAGCTGCTATAAATCATGGAAAACAAATTGTAAGGTTTACTCAGCGCAATATTTTGAGGGTGTATCCCAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGATATGGTAGATCGCTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAGAAACCAGATTTTCTGTTACAGACTGGTCCAGACAATGAGGTCTTCGATCCGAAAGCCAAATTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATACTCCCCTCCTGACTTCTATACAAGAGTGGGGATTGCTGGAGTCCCTAGTGATACCGTAATGAAGAAAACTAAGGCAATAGAGGATAATTGGTTACCTACATGGAATGAGACATTTGAGTTCCCTCTTTCTGTTCCAGAGTTGGCCTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCTATCCGGGAGCTAAGAAGTGGCATTCGAGCAATTCCACTGAATAGCCAAAAGGGAGAGAAATACCCCTCTGTAAAGCTTCTCATGCGCTTTGAGTTTATTAATTGA 1872 0.4327 MDEHNKKVEVNSESTRTNSHSLAYICVGSEREQRREREQVMSKQTYSVCFCWRRRFKLALAEAPLEIKTLFEEYSENEIMTPSHLKRFLVEVQKQEKATEEEAQAIIDSFRHFHRRGVGLNLESFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSECSDVPIINALKRGVRVIELDIWPNAAKDNINVLHGNTLTPPVELIRCLRSIKEYAFVASEYPVVITLEDHLTTDLQAKVAEMVTNTFGDILFTPNTESVKEFPSPDSLKRRIIISTKPPKEYLGAKEKDKGNDSQHEKGKEDGKASGEDEAWGKEVPSLRGGTIEDYKDESDESVKLAHNEAPEYRRLIAIHAGKPKGGLEECLKVDPDKVRRLSLSEQQLEKAAINHGKQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLQTGPDNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPSDTVMKKTKAIEDNWLPTWNETFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPIRELRSGIRAIPLNSQKGEKYPSVKLLMRFEFIN 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01569 623 MobiDBLite consensus disorder prediction 293 343 - -
Vian7g01569 623 FunFam Phosphoinositide phospholipase C 489 622 - -
Vian7g01569 623 Pfam Phosphoinositide-specific phospholipase C, efhand-like 66 133 IPR015359 -
Vian7g01569 623 SMART C2_3c 494 602 IPR000008 -
Vian7g01569 623 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 387 473 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Vian7g01569 623 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 386 472 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Vian7g01569 623 SMART plcx_3 145 289 IPR000909 -
Vian7g01569 623 CDD C2_PLC_like 492 621 - -
Vian7g01569 623 Gene3D Phosphatidylinositol (PI) phosphodiesterase 142 487 IPR017946 GO:0006629|GO:0008081
Vian7g01569 623 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 494 622 IPR035892 -
Vian7g01569 623 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 145 289 - -
Vian7g01569 623 Gene3D - 61 141 - -
Vian7g01569 623 PRINTS Phospholipase C signature 176 196 IPR001192 GO:0035556
Vian7g01569 623 PRINTS Phospholipase C signature 412 433 IPR001192 GO:0035556
Vian7g01569 623 PRINTS Phospholipase C signature 433 451 IPR001192 GO:0035556
Vian7g01569 623 PRINTS Phospholipase C signature 273 290 IPR001192 GO:0035556
Vian7g01569 623 PRINTS Phospholipase C signature 588 598 IPR001192 GO:0035556
Vian7g01569 623 PRINTS Phospholipase C signature 150 168 IPR001192 GO:0035556
Vian7g01569 623 ProSiteProfiles C2 domain profile. 475 604 IPR000008 -
Vian7g01569 623 SUPERFAMILY PLC-like phosphodiesterases 148 485 IPR017946 GO:0006629|GO:0008081
Vian7g01569 623 SMART plcy_3 357 474 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Vian7g01569 623 Gene3D C2 domain 489 623 IPR035892 -
Vian7g01569 623 Pfam C2 domain 495 596 IPR000008 -
Vian7g01569 623 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 30 621 IPR001192 GO:0035556
Vian7g01569 623 FunFam Phosphoinositide phospholipase C 61 140 - -
Vian7g01569 623 SUPERFAMILY EF-hand 57 147 IPR011992 -
Vian7g01569 623 Pfam Phosphatidylinositol-specific phospholipase C, X domain 147 289 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01569 Vian-Chr7 24610643 24616333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01569 41 622 Acyl Lipid Metabolism Gene Families AT3G55940 66.722 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01569 K05857 - gmx:100037460 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03007 2 50729969 50733929 Vian7g01569 7 24610643 24616333 ECH
Vian7g01938 7 31185473 31189958 Vian7g01569 7 24610643 24616333 ECH
Vian7g01569 7 24610643 24616333 Vian7g01569 7 24610643 24616333 ECH
Vian2g03007 2 50729969 50733929 Vian7g01569 7 24610643 24616333 PCT