Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01540 ATGGCAATTTTAGCTGAAGACTTCTTCAAAGAGAGGAAATACCCTTTCATTTTCACCCTCTTAATCTTGCTCATTTGTGTCGCGTTCTTCCTCTTCAGCTTCTCCAGCACCACCTCAAACCCTGTTGCTTTCAATTCTGTTATCCAACACCAAGCACCTCCTCATCATGCTTCAAAACCGAAAGAGCAAGAGCTTCCTCCAAAGGTGACCAATGTCACTGCTGAAGAAGACCAAGGTTTGCCCCCAGAGGAGGATGCTGTGACCATTGATTGGAAGCTGTGTAAGGACCCGCAGAATGTTGATTTTATACCATGTTTGGATAATTTTTTGGCAATTAAGGCTCTTAAGTCAAGGAGGCACATGGAGCACAGGGAAAGACATTGCCCTGAGACTAGTCTTCACTGCTTGTTGCCTCTTCCAAAAGGGTATAAAGCCCCAGTTCCGTGGCCTAAGAGCAGGGATAAGATTTGGTATGATAACGTTCCTCATCCGAAGCTGGTGGAGTACAAGAAAGACCAGCACTGGGTAGTAAAGTCTGGAGAATATCTAGTTTTTCCTGGTGGTGGTACTCAATTCAAAGATGGAGTAGATCATTACATTGAGTTCATACAGAAGACATTACCAGCAATTAAATGGGGAAAGCATACCAGGGTTGTTCTAGATGTTGGCTGTGGTGTTGCTAGCTTTGGTGCCTATTTGCTGGACAAAAATGTTATTACTATGTCATTTGCCCCAAAGGATGAACATGAAGCTCAGATACAGTTTGCCTTGGAACGAGGAATACCTGCAACTCTTTCTGTCATTGGAACACAGAAGTTGACTTTTCCTGATAATGGCTTTGATTTGATCCATTGTGCACGATGTAGGGTTCACTGGGATGCAGATGGTGGGAAGCCCTTATTTGAGCTCAATAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCAACACCAGTCTACCGAGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGGATATAACAAAAGCCATGTGCTGGAAGGTTGTGGCTAAGGCTCATGATTCATCTGGAATTGGACTTGTTATATACCAGAAGCCCACTTCATCTTCTTGCTATGAGAAACGTAAAGAGAACAATCCACCTTTGTGTGAAAATGAAGATGGGAAGAACAGCTCATGGTATGCCAGGCTCAATAGTTGCCTGACTCCTCTTCCGGTTGATGATAAGGGTAACCTGCTGAGCTGGCCTAAGTCTTGGCCCCAGAGGCTTACCAGTAAGCCACCTAGCTTACCTACTGATTCAGTTTCCAAGGATAAGTTCTTCAAGGACAGCAAACGCTGGTCTGAATTAGTTTCAGATGTTTATGTGAATGGTCTCCCTATAAATTGGTCAAGTGTCAGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCTGCTGCTCTTGTTGATCTTCCAGTGTGGGTGATGAATGTAGTACCTATTGATGTGCCTGATACTCTTAGTATTATAATGGACAGAGGGTTTATAGGAATGTATCATGATTGGTGCGAGTCCTTTAGTACCTATCCTCGCACATACGATCTTCTTCACTCTAGCTTTCTGTTCAAATATCTTGAGCCAAGATGTGACATTTTAGACGTGGCTGTGGAGATTGATCGCATATTGAGACCAAATGGATATCTCGTGGTTCACGATTCTATGGAGATACTAAACAAGCTCACTCCAATTTTGCGTTCACTTCACTGGTCTGTCACGTTGCATCAGGATCAGTTTCTTGTAGCTAGGAAGGGTTTCTGGCGACCTACGAGCTCTTCAGACTGA 1818 0.4362 MAILAEDFFKERKYPFIFTLLILLICVAFFLFSFSSTTSNPVAFNSVIQHQAPPHHASKPKEQELPPKVTNVTAEEDQGLPPEEDAVTIDWKLCKDPQNVDFIPCLDNFLAIKALKSRRHMEHRERHCPETSLHCLLPLPKGYKAPVPWPKSRDKIWYDNVPHPKLVEYKKDQHWVVKSGEYLVFPGGGTQFKDGVDHYIEFIQKTLPAIKWGKHTRVVLDVGCGVASFGAYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDQKVWNAMVDITKAMCWKVVAKAHDSSGIGLVIYQKPTSSSCYEKRKENNPPLCENEDGKNSSWYARLNSCLTPLPVDDKGNLLSWPKSWPQRLTSKPPSLPTDSVSKDKFFKDSKRWSELVSDVYVNGLPINWSSVRNVMDMNAGYAGFAAALVDLPVWVMNVVPIDVPDTLSIIMDRGFIGMYHDWCESFSTYPRTYDLLHSSFLFKYLEPRCDILDVAVEIDRILRPNGYLVVHDSMEILNKLTPILRSLHWSVTLHQDQFLVARKGFWRPTSSSD 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01540 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 334 IPR029063 -
Vian7g01540 605 CDD AdoMet_MTases 219 313 - -
Vian7g01540 605 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 589 IPR004159 GO:0008168
Vian7g01540 605 FunFam probable methyltransferase PMT23 191 374 - -
Vian7g01540 605 Gene3D Vaccinia Virus protein VP39 192 387 IPR029063 -
Vian7g01540 605 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 599 IPR004159 GO:0008168
Vian7g01540 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 451 578 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01540 Vian-Chr7 24236205 24239849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01540 - - gmx:100800390 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01540 7 24236205 24239849 Vian7g01540 7 24236205 24239849 ECH
Vian2g03027 2 50932201 50936437 Vian7g01540 7 24236205 24239849 PCT