Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03027 ATGGGAATTTGGGTCGAAAGACTGTTGAGAGAGAGAAAATGCCCTTTCTTTCTCACCCTCTTGGTCTTTGTGGTTTGTGTGAGCATCCTCACGTTCACGAAAAACGCAGCCTCTAACTTGGATCCCATTGGCTTCTATCTTGATGTGAAAGCGCAACAACCTCTGGCACATTTTTCTTCGCCGGCTCCCAAACGCCAAAGATTGCCACTCAAGGGAGAGCCTTTCTTGGATGATGCAAACATTGATTGGAAGCTTTGTAAGGGTCACTTCGCTTTCGACTATGTACCCTGTTTGGATAACCTTAAGGTCATTAAAGCTCTCAGGACAAGGAGGCACATGGAACACAGGGAAAGACACTGTCCTCATTCTCCTCTCCACTGTCTGGTGCCCCTTCCCAGAGGCTACAAACTCCCCCTTCCGTGGCCTAAGAGCAGGGACATGGTGAGATTGATACTTCGGTGTTTTGGTTTCCAGATTTGGTATGATAATGTCCCTCATCCGAAGCTGGTTGAATACAAGAAGGAGCAAAACTGGGTGGTGAAGTCCGGAGATTATCTCGTCTTTCCCGGAGGTGGTACTCAGTTCAAAGAAGGTGTTAACCATTATACTGAATACATAGAGAAGTTGACATTTCCTGACAATGGATTTGATTTGGTACACTGTGCAAGATGCAGGGTGCATTGGGATGCTGACGGTGGGAAACCGTTGTTTGAGCTGAACAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCCACACCAGTTTATCGCGATGATGAAAGAGATCGCAAAGTATGGAATGCCATGGTGACAGTAACAAAAGCAATGTGCTGGAGTGTTGTGGCTAAGACTCTGGACTCATCTGGTATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCTTGTTATCAGGAACGCAAAGAGAATACTCCTCCTTTATGTGAATATAGCGACAAGAAAAGTGTCTCATCCTGGTATGCCAAACTCAGTGGTTGCCTCATTCCTCTTCCAGTTGATGGTGAGGACGTTTATATAGATGGTCTGTCTATAAACTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATGTGAGATTGTAGATGTGGTTGTGGAGATAGATCGCATACTGAGACCAGATGGGTATGTACTGGTTCAGGACACTGTGGAAATGATGAACAAGCTTGGTCCGGTTCTGCATTCACTTCATTGGTCTGTAACATTGTATCAAAATCGGTTTCTTGTTGGTAAGAAGAGTTTCTGGCGTCCAAGACCTTAG 1296 0.4529 MGIWVERLLRERKCPFFLTLLVFVVCVSILTFTKNAASNLDPIGFYLDVKAQQPLAHFSSPAPKRQRLPLKGEPFLDDANIDWKLCKGHFAFDYVPCLDNLKVIKALRTRRHMEHRERHCPHSPLHCLVPLPRGYKLPLPWPKSRDMVRLILRCFGFQIWYDNVPHPKLVEYKKEQNWVVKSGDYLVFPGGGTQFKEGVNHYTEYIEKLTFPDNGFDLVHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDRKVWNAMVTVTKAMCWSVVAKTLDSSGIGLVIYQKPTSSSCYQERKENTPPLCEYSDKKSVSSWYAKLSGCLIPLPVDGEDVYIDGLSINWSSVRNVMDMNAGYAGCEIVDVVVEIDRILRPDGYVLVQDTVEMMNKLGPVLHSLHWSVTLYQNRFLVGKKSFWRPRP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03027 431 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 308 IPR029063 -
Vian2g03027 431 Gene3D Vaccinia Virus protein VP39 193 303 IPR029063 -
Vian2g03027 431 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 370 428 IPR004159 GO:0008168
Vian2g03027 431 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 370 417 IPR004159 GO:0008168
Vian2g03027 431 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 207 343 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03027 Vian-Chr2 50932201 50936437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03027 - - aew:130762808 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03027 2 50932201 50936437 Vian2g03027 2 50932201 50936437 ECH
Vian2g03027 2 50932201 50936437 Vian7g01540 7 24236205 24239849 PCT