Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01506 ATGACAGACACTCGGAAACTTGCCGCAGCCGGTTTCCCGGCAACTTCGAGGGTGAAACCCGAGCCTGGTGTTGTACCCGGGTCAGGTCAGAACCCGGGGATTATAAGGTTTGGTTTGAGAGCTGAAATTGATACTTCGCCGCCGTTTGCGTCTGTCAAGGAAGCGGTGACCCGTTTTGAAGGAACCGGGCCTTGGACACCCTTTTACAAATTTGGAGAGAACATTGTTGAAGACTTTGACATAAAGAGAGTGGAGGAAGAAGCAGCAAAGTTAGAAAAGGATTTGATAGTGAAAGAACTCGAAACACTTGATGTGCTTGAAGAACTGGGAGCTACCAAAGCAATTTTGGAGGAATTGAAGCTGCAGCTACAATCAGAAGCATTGAATTGTTTAGCAACTCGAGGTGAGAATTCATGTGAACAAGCTGGAGCTGCTACTAGAAATTGTGAGAATGGTATCAACAATGAAGAGCAGACATTGCAAAGTTCGAGTCAGTGTGCACCTTTACCTGATCTGTTCTTAGTGGAGTTAAGACAAGCTAAAGTAAGTCTTGGTAAAACTATTAATGATCTTGGAGTGATACAATCCTCTGTTGAAGATTTAAATAAGAAAATGAAGAAGGAAAGGCTTTTTGTTGAGAGGGCACGAGAGAAGCTGGCATCGAAGTTTGCAGCTGTCTCTACTCAAGAAGTAACCAAAACAGAAGCAGGGTTTAATCCTCCTGAAGCTACTGTAGGAACAGGTTGCACGTGTCACCATCCCCTTAATGGTGGGAGGAGTTTTGGATTTGATACTGGACAGTGCAATCGAATTAATGAAACAAGAAGCTCTGAAGTTTTAAGGCCCTTGCCTGAGTTTGGTGAGAATGGATTTAGTATTAAGACTGCTGAGATGAGGTGGTTTGCAGCTAAAAAGATGGAAGAAGCTGCAATGGCGGCAGAAGCCGTTGCTCTTGCTGAAATTGAGGCTCTTTGTTGCCATGAGATATCATCTGAATTTTCTTTTCCAGAACATCAGAAAGTGACTTTTGCCTTAGGGGAGTGCTCTCCTCTAAATCCCGTAGTTCAGTTTCCTCAAGAGTCAACCTTGGAGAAGGTAACAGATTCCGAGTTCCAAATTGACAAAATAGGCATTTCTAAACTGGGTATTTTGAAAAAGTTTGAGGAAGCAACAGAGGAAGTTCTACGCAGCAAACAAGTCTTGACTGAGGTATTGAATAGTGTTGAAAGTGCAAACATAAAGCAGCTTGCTGCTGAAGAGGCTCTTCGGAGATGGATTCCTGAGAATGATCTAAAAGGGCAGACATTGACTAAGAGCAGCATGTTCAAACAAGCTGGAATTTGTCAAGATTCTCCTCTACCAGATGTAATCCGATCAATTACAACTAACAATGATCCGAAGCATGCCTTAAGGTCTTCAGTTTCAATGAGAGATGTACTTAGCAAAAAGCCAGTTCTTGAAGATTGTACTTCAACAAAGGATATGCAAGAGCATTCTGGACAGACAGTAGCCTTGAGTCAAATGCTTCGAGCATTGAAGGAGGATCAAACTCTGCCGACAATACCCGAGAAAGATGTGAAGAGTAATCAAAAGCAAAAGCAGTTCATAGCATCTAGGAAAAAGTTCAGTTTCATCCAAATATCACTGCCCTTGGGAAAGCGAAGTAAGAAGAAGACATGA 1680 0.4262 MTDTRKLAAAGFPATSRVKPEPGVVPGSGQNPGIIRFGLRAEIDTSPPFASVKEAVTRFEGTGPWTPFYKFGENIVEDFDIKRVEEEAAKLEKDLIVKELETLDVLEELGATKAILEELKLQLQSEALNCLATRGENSCEQAGAATRNCENGINNEEQTLQSSSQCAPLPDLFLVELRQAKVSLGKTINDLGVIQSSVEDLNKKMKKERLFVERAREKLASKFAAVSTQEVTKTEAGFNPPEATVGTGCTCHHPLNGGRSFGFDTGQCNRINETRSSEVLRPLPEFGENGFSIKTAEMRWFAAKKMEEAAMAAEAVALAEIEALCCHEISSEFSFPEHQKVTFALGECSPLNPVVQFPQESTLEKVTDSEFQIDKIGISKLGILKKFEEATEEVLRSKQVLTEVLNSVESANIKQLAAEEALRRWIPENDLKGQTLTKSSMFKQAGICQDSPLPDVIRSITTNNDPKHALRSSVSMRDVLSKKPVLEDCTSTKDMQEHSGQTVALSQMLRALKEDQTLPTIPEKDVKSNQKQKQFIASRKKFSFIQISLPLGKRSKKKT 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01506 559 Coils Coil 81 101 - -
Vian7g01506 559 Coils Coil 106 126 - -
Vian7g01506 559 Pfam Weak chloroplast movement under blue light 292 429 IPR008545 -
Vian7g01506 559 Pfam Weak chloroplast movement under blue light 41 234 IPR008545 -
Vian7g01506 559 Coils Coil 198 218 - -
Vian7g01506 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 167 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01506 Vian-Chr7 23887346 23889279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01506 - - gmx:100781281 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03059 2 51194015 51196657 Vian7g01506 7 23887346 23889279 ECH
Vian7g01506 7 23887346 23889279 Vian7g01506 7 23887346 23889279 ECH
Vian2g03059 2 51194015 51196657 Vian7g01506 7 23887346 23889279 PCT