Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03059 ATGGCAGAAACTCGAGACGCCGCCGCCGCCGCCGATGGGGTGCCCGGAACGCCCGCCATAAGGGAAGTCAGACCCGAGGCAGGGAACCATGGCGGAATCGGGTCAGGCGGAATTCGGAGAGTGAATTTCCGAGCGGAGATTGACACGTCACCGCCGTTTGGATCGGTTAAAGAAGCCGTGACCCGTTTTGGAGGTAGCGGGCCTTGGATGCCGTTTTTTAACAGCATTGAAGATTTTGACATAAAGAAAGTGGAGGAACAGGCAGCGGAGTTGGAAAAGGATTTGATTGTCAAAGAACTTGAAACTCTTGATGTGCTTGAAGAACTGGGAGCTACTAAGAGGATTGTGGAGGACTTGAAGCAGCAACTGCAAAAAGAGGCTATGAAATGTTTTGCATCACGAGATGTAAGTTCATATGAACAAGTTGGAACTCCTGTTATCAAGGAGATGGATAAGGAAAATTGTGGAAACAATGTCAATGATCAAGAACAGATGATGCAAATTCCAAGCCCGTGCTCTATTATGTCATCATCACCTGATATGATCTTAATGGAGTTGAAGCAAGCCAAGTTGAATTTATGCAAAACTATAAATGAACTTGGGGTGATACAGTCCTCTGTTGAGTCTTTGAACAAGAAGATGAAGAAGGAGAAATTTTTTTTGGAGAGGACACGAGAAAAGCTAGCATCGAAGTTTGCAGCAGTATCTGCTCTAGAGAGGGTCCAAGAGCAGACAAAATTAAATCCTCCAGCATCTCATGTAGATTGTGCGTCAGGTAACCCTGCTAATACTGTAAGAAATTTCAATTCTGATTCCGGGCAGTGCAATAGAATGGTTGAGACTAGAAGATCTGAACCTTCAAAGCCCTTAAGTGTGTATGAAGAATATGGATTCAGTGTTAAGACTGCTGAGATGAGGTGGCTCGCTGCTAAAAAGATGGAAGAAGCTGCAAGGGCAGCAGAATCCGTTGCTCTTGCTGAAATCAAGGCTCTATCTAATGCTGAAAGATCTTCAGGATTTGTTCTGCCAGAGCCTGAGAAAGTCAGTTTTGCTTTTGGAGATCGCTCTCCCCTAAACTCCAAGGCTCATATACCAGAGGAGTCAACTTTGAAGAAGGTAATAGATGCAAAGTTTCAAATTGATGAAACAAAAATTTCTAAACTGACTATTTTGAAGAAGTTGGAGGAAGCAACGGAGGAAGTTCTACACAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAAGTGCAAACCAAAAGCAATATGCTGCTGAGGAGGCTCTAAGGAGATGGATTCCAGAGGATGATCTCAGGAGGTATAACACTATTTATTGTAACAAGCTTAATCAAGGTGGAATCTGTCAAGATTCTCTGAATGATGTAACCAGGTCAACAACAGCAAACAATGGTCCAAAGGCAACATTAAGACCCACAATTTCTATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACTGAAAGACAAAAGGTGGCGTTGAGTCAAATGCTTCAAGCATTGAGGGAAGATCTAACTCTTCCAACAAAGACTGAGAAAGATGGGAGCAATCAGAAGCAGTTCATGCCACCAAGGAAGAAATTTGGATTCATTCAAATATCACTGCCCCCATTGACAAAACCAAGCAAGAAAAGGGCATAA 1695 0.4319 MAETRDAAAAADGVPGTPAIREVRPEAGNHGGIGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWMPFFNSIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCFASRDVSSYEQVGTPVIKEMDKENCGNNVNDQEQMMQIPSPCSIMSSSPDMILMELKQAKLNLCKTINELGVIQSSVESLNKKMKKEKFFLERTREKLASKFAAVSALERVQEQTKLNPPASHVDCASGNPANTVRNFNSDSGQCNRMVETRRSEPSKPLSVYEEYGFSVKTAEMRWLAAKKMEEAARAAESVALAEIKALSNAERSSGFVLPEPEKVSFAFGDRSPLNSKAHIPEESTLKKVIDAKFQIDETKISKLTILKKLEEATEEVLHSKQVLTDALNRVESANQKQYAAEEALRRWIPEDDLRRYNTIYCNKLNQGGICQDSLNDVTRSTTANNGPKATLRPTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLQALREDLTLPTKTEKDGSNQKQFMPPRKKFGFIQISLPPLTKPSKKRA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03059 564 Coils Coil 81 101 - -
Vian2g03059 564 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 45 133 - -
Vian2g03059 564 Coils Coil 106 126 - -
Vian2g03059 564 Coils Coil 502 522 - -
Vian2g03059 564 Pfam Weak chloroplast movement under blue light 45 133 IPR008545 -
Vian2g03059 564 Pfam Weak chloroplast movement under blue light 183 436 IPR008545 -
Vian2g03059 564 MobiDBLite consensus disorder prediction 524 564 - -
Vian2g03059 564 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03059 Vian-Chr2 51194015 51196657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03059 - - gmx:100776514 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03059 2 51194015 51196657 Vian7g01506 7 23887346 23889279 ECH
Vian2g03059 2 51194015 51196657 Vian2g03059 2 51194015 51196657 ECH
Vian2g03059 2 51194015 51196657 Vian7g01506 7 23887346 23889279 PCT