Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01396 ATGAACCTCAGAGGCAACGAAGAATGTGTTCCCCAAATTTTTGATGTTGATCCAAACAAGACCTACAGAATTAGAATTGCTAGTGCCACTTCCTTGGCATCTCTCAACTTGGCCATTGGGAACCACAAATTGGTGGTGGTGGAAGCTGATGGAAACTACGTGAAACCATTTACTGTTGACGACATAGACATATATTCAGGTGAAACCTATTCAGTCCTCCTCAGAACAAATCAAGATCCAAGGAAGAATTATTGGATTTCAATTGGTGTTAGAGGAAGAAAACCTAACACCCCACAAGGATTAACTATCCTAAATTACAAAACAAACTCTGCCACACTTCTTCCCACTTCTCCACCACCAATAACACCTCAATGGGATGATTACAATCGTAGCAAGACATTCACTTACAATATTTTTGGCCTCAAGGGAACCCAAAAACCTCCTAAATACTATCATCGTAGACTTCTCCTTCTCAACACACAAAACCTCGTTAGTGGTTACACTAAGTGGGCCATCAACAATGTCTCCTTAACATTGCCATCAACTCCTTACCTAGCCTCTATTAACGTTAATGGCTCCTTTGACACTAAAATCCCTCCAAACACATTCTTAGAGGGTTATGACATCTACAACCCTCCCCTCAACCCTAATGCAAACACTGGTAGTGGGGTTTACATGTTCCAGTTAAACCAAGTTGTAGATGTCATACTGCAAAATGCCAATGTACTGAAGGGGCAAAACAGTGAGATTCACCCTTGGCATTTGCATGGGCATGACTTTTGGGTTTTGGGGTATGGAGATGGCAAGTTTCAACAGAGTGATGAGAGAAAATTCAACTTGAAGAACCCACCATTGAGGAACAATGTAGTGGTATTCCCATATGGTTGGACTGCTTTGAGGTTCAGGGCAGATAACCCTGGAGTTTGGCCCTTCCATTGTCATATTGAGCCTCATTTATACATGGGAATGGGTGTCGTTTTTGCTGAGGCTCTTTTAAATGTTAAGCGAATACCTAATCAGGCTCTAGCTTGTGACCTTCTTAGGAAGGTGTCAATACATAAGAAACATACCTAA 1074 0.4162 MNLRGNEECVPQIFDVDPNKTYRIRIASATSLASLNLAIGNHKLVVVEADGNYVKPFTVDDIDIYSGETYSVLLRTNQDPRKNYWISIGVRGRKPNTPQGLTILNYKTNSATLLPTSPPPITPQWDDYNRSKTFTYNIFGLKGTQKPPKYYHRRLLLLNTQNLVSGYTKWAINNVSLTLPSTPYLASINVNGSFDTKIPPNTFLEGYDIYNPPLNPNANTGSGVYMFQLNQVVDVILQNANVLKGQNSEIHPWHLHGHDFWVLGYGDGKFQQSDERKFNLKNPPLRNNVVVFPYGWTALRFRADNPGVWPFHCHIEPHLYMGMGVVFAEALLNVKRIPNQALACDLLRKVSIHKKHT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01396 357 Gene3D - 1 144 IPR008972 -
Vian7g01396 357 SUPERFAMILY Cupredoxins 6 142 IPR008972 -
Vian7g01396 357 PANTHER MULTI-COPPER OXIDASE 9 326 IPR045087 -
Vian7g01396 357 Pfam Multicopper oxidase 7 108 IPR001117 -
Vian7g01396 357 ProSitePatterns Multicopper oxidases signature 1. 307 327 IPR033138 -
Vian7g01396 357 SUPERFAMILY Cupredoxins 151 329 IPR008972 -
Vian7g01396 357 Pfam Multicopper oxidase 219 329 IPR011706 GO:0005507|GO:0016491
Vian7g01396 357 CDD CuRO_3_AAO 153 338 IPR034267 GO:0005507
Vian7g01396 357 ProSitePatterns Multicopper oxidases signature 2. 312 323 IPR002355 GO:0005507
Vian7g01396 357 FunFam L-ascorbate oxidase 145 355 - -
Vian7g01396 357 Gene3D - 145 356 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01396 Vian-Chr7 22447230 22449731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01396 K00423 - gmx:102666289 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01396 7 22447230 22449731 Vian7g01396 7 22447230 22449731 ECH
Vian2g02556 2 46194175 46198527 Vian7g01396 7 22447230 22449731 ECH
Vian3g02633 3 40904810 40908916 Vian7g01396 7 22447230 22449731 ECH