Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01196 ATGATGGGTCAGATCGTGCGGAGGAAGAAGAAGGGACGTCCATCAAAGACAGATCTAGCACGCCGCTCCGGTCAATCTCCGGCATCCTCCCAGCCAGACCTACGACGGAGCCGCCGCCGCCGGAATGTGCGCTACAACATCGACTACGACGACTACCTTGACGAGGAGGACGAGGACGAAGAGGAGGACGAGAGGAGGCGCGAGAAGAAGAAGCTCAAGCTGGTGGTGAAGCTCAACAACAACGAGGAGGAAGACGATGACGAGGAGGAGGACGCGCCGAGTCATGTGGGGGCGCGTGGAGTGCACGCGCAGGAGGAAAAGGGGGAGGAGGAGGAGGATGAGGGAGAGGAGGAAGAGGAAGAGGAGGAGGAAGGGAATGAGGAGGCGGAGGAGCTGGAAGAAGAGCGTGAGGCAAAGGGAAGAAAAGTGGATTCTAAAGGGCTCCACTCAGTTTCAGTGTTAGGAACTCCGTCGAAGCTTCCACCTGGGATTCCGTTGCCTGACAAGAGGACCCTGGAGTTGATCCTTGACAAGCTTCAGAAGAAGGACACATATGGTGTGTATGCTGAACCAGTTGATCCAGAAGAGCTTCCTGATTATCATGATGTGATTGAGAATCCAATGGACTTTTCCACAGTGAGGAAGAAATTGGCAAATGGATCCTATCCTACCTTGGAACAATTTGAGAGTGATGTATTTTTGATTTGCTCGAATGCAATGCAATACAATGCAGCGGAGACTATATACCACAAACAGGCAAGATCGATACAAGAACTGGCTAGGAAAAAGTTTGAAAAGTTACGGTTTGACTTTGATCGCTCTCAGAGTGAGCTGAAGTCTGAACAAAAAACTAGATCTAATTCCCTGGTTAAGAAGTCAGCAAAGAAGCCACTGGGTCATACTTCACAGGAACCAATTGGCTCTGATTTTTCCTCTGGTGCAACTCTTGCTACTATTGGAGATGTATTGCCAACATCCCATCCAATGCAAGGTGTCGTTTGTGAAAGGCCTGGAAATATTGATGGTCTTGTGGAGGGGAATGCTTTCATTATTGATGCAAATCAAGAGAAAGCAGAAGACTACATATCAGGGAGGGGTCTGCTTTCCAAGTTGGGAAGGAAACCATCTATGCAAGATATGGAACGTCGTGCAACTTATAATATGCCTAATCCACCAGCTACGAGATCGGATTCTGTATTTACAACATTTGAGGGTGAAGTGAAGCAGCTGGTTACTGTTGGACTTCAAGCTGAGCACTCCTATGCCAGGAGTTTGGCTCGTTTTGCTGCAACTCTAGGACCTACAGCTTGGAGAATCGCTTCCCAGAGGATTCAGCAGGCACTACCACCTGGCTGTAAATTTGGTCGTGGTTGGGTTGGAGAGTATGAACCACTTCCCACACCAGTATTAAAGCTTGATAATCTTGCCCAGCAGCAACCTATTTTGGGGACTAAGACGCAGTCTACTGCTGAGTTAATAAAGGTTGACAAAAATTGTAAGAATGTGGAATCCACCTCGGAACATCCTGTTAATGGACCAATCCATGAGGGAAAACAGCCTTCTGTCTGTTCTAGTAGTGGGCTTACATCGGATGGCAAATCATCTTTGTTTGGTTCTGCTGGATCAAGACCCAATTCTCATGACAATCTCTTTTATCCACAACCCAATGTCCAAACTAGGAACCTCAACAAGTCTGAGAACAAGGGTTTGAAACAAGTGGAATTGAACTCTTTACCCTCCAGTGATCAGAATAATGCCAGTCTAGTTGCAAAGCTTACAAGTAATGCTCCTGCAGCAGTGTCTAAGCCCAGAGAAATGATACCTAGTAACTTGACTATTTTACCGTCTATGCCTTTCAAGCAGCCAGATACCAACGGAGTTGTTGGTGGAGAGTTGCCCAATGGAAAAGTAAGGAATACTAGTTTAAACAGACGGATGCCTGGTGCATCATCCGAAAGTACGTCAAATCAAACAGGTAGATCAGCTCCCTTTGTTGCCCATGGACAGGAGCAGACTCTTAGTGACCCAGTTCAGTTGATGAGGATGTTAGCCGAAAAGACACAAAAACAACAGACTTCTAGTTCATCCAATCATTCCCCTGCTGACACCCCACCAGTGACCCCATCAGTTCCATTGGGACGGAGAGAGGATTTGAGCAATGCTTCAGCAGCAGCTGCCCGTGCATGGATGTCTGTTGGTGCAGCAGGTTTTAAACAAGGACCTGAAATTTCTAGTTCACCCAAAAATCAGATTTCTGCAGAATCATTGTACAACCCAGCGAGAGAGTTCCATCAGCCCTTTTCACGAATTAGGGGAGAGTTTTCTCCTGGTGGAACACCTTTCCAGTCTGAGAAGAACAATTTTCCATTTCAGGCACTTGTACCCCAATCTCAACCTATTCAACCAGTTGGTGCTTCACAGTTTCCAAACAGACCTATGGTCTTCCCTCAAGTAGCAGCTTCTGACTTGTCAAGATTTCAGATACCACCTTGGCGGGGTATCCGACCTCACAGTCAACCAAGACAGAAACAGGAAACACTTCCTCCTGACCTGAACATTGGTTTCCAACCTCCTGGTTCACCTGCAAAACAATCATCTGGTGTGCTGGTTGACTCTCAGCAACCAGACCTTGCTTTGCAACTGTGA 2646 0.4724 MMGQIVRRKKKGRPSKTDLARRSGQSPASSQPDLRRSRRRRNVRYNIDYDDYLDEEDEDEEEDERRREKKKLKLVVKLNNNEEEDDDEEEDAPSHVGARGVHAQEEKGEEEEDEGEEEEEEEEEGNEEAEELEEEREAKGRKVDSKGLHSVSVLGTPSKLPPGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFSTVRKKLANGSYPTLEQFESDVFLICSNAMQYNAAETIYHKQARSIQELARKKFEKLRFDFDRSQSELKSEQKTRSNSLVKKSAKKPLGHTSQEPIGSDFSSGATLATIGDVLPTSHPMQGVVCERPGNIDGLVEGNAFIIDANQEKAEDYISGRGLLSKLGRKPSMQDMERRATYNMPNPPATRSDSVFTTFEGEVKQLVTVGLQAEHSYARSLARFAATLGPTAWRIASQRIQQALPPGCKFGRGWVGEYEPLPTPVLKLDNLAQQQPILGTKTQSTAELIKVDKNCKNVESTSEHPVNGPIHEGKQPSVCSSSGLTSDGKSSLFGSAGSRPNSHDNLFYPQPNVQTRNLNKSENKGLKQVELNSLPSSDQNNASLVAKLTSNAPAAVSKPREMIPSNLTILPSMPFKQPDTNGVVGGELPNGKVRNTSLNRRMPGASSESTSNQTGRSAPFVAHGQEQTLSDPVQLMRMLAEKTQKQQTSSSSNHSPADTPPVTPSVPLGRREDLSNASAAAARAWMSVGAAGFKQGPEISSSPKNQISAESLYNPAREFHQPFSRIRGEFSPGGTPFQSEKNNFPFQALVPQSQPIQPVGASQFPNRPMVFPQVAASDLSRFQIPPWRGIRPHSQPRQKQETLPPDLNIGFQPPGSPAKQSSGVLVDSQQPDLALQL 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01196 881 Gene3D - 101 289 IPR036427 GO:0005515
Vian7g01196 881 MobiDBLite consensus disorder prediction 627 670 - -
Vian7g01196 881 Coils Coil 53 73 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 518 561 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 685 703 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 275 310 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 63 80 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 501 561 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 829 881 - -
Vian7g01196 881 PRINTS Bromodomain signature 197 213 IPR001487 GO:0005515
Vian7g01196 881 PRINTS Bromodomain signature 213 231 IPR001487 GO:0005515
Vian7g01196 881 PRINTS Bromodomain signature 231 250 IPR001487 GO:0005515
Vian7g01196 881 MobiDBLite consensus disorder prediction 858 881 - -
Vian7g01196 881 ProSitePatterns Bromodomain signature. 186 242 IPR018359 -
Vian7g01196 881 MobiDBLite consensus disorder prediction 1 165 - -
Vian7g01196 881 PANTHER BROMODOMAIN CONTAINING PROTEIN 7 880 - -
Vian7g01196 881 SUPERFAMILY Bromodomain 157 267 IPR036427 GO:0005515
Vian7g01196 881 MobiDBLite consensus disorder prediction 636 670 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 107 133 - -
Vian7g01196 881 Coils Coil 101 142 - -
Vian7g01196 881 Pfam Bromodomain 174 254 IPR001487 GO:0005515
Vian7g01196 881 MobiDBLite consensus disorder prediction 1 16 - -
Vian7g01196 881 CDD Bromodomain 168 264 - -
Vian7g01196 881 ProSiteProfiles Bromodomain profile. 180 250 IPR001487 GO:0005515
Vian7g01196 881 MobiDBLite consensus disorder prediction 685 714 - -
Vian7g01196 881 MobiDBLite consensus disorder prediction 92 106 - -
Vian7g01196 881 SMART bromo_6 161 269 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01196 Vian-Chr7 20241340 20246078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01196 K22184 - gmx:100799986 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01196 7 20241340 20246078 Vian7g01196 7 20241340 20246078 ECH
Vian6g00384 6 16713429 16719515 Vian7g01196 7 20241340 20246078 PCT