Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01192 ATGGAGGAGCACACTTTCGTGTCCAAAGCGAGGTTCGCCTTTCATTCTGCGGCGGCGAAAGCGGAGCGCGTGCTTATGGATTTCAAATCCGATCGAGCATTGACTCAATTTGTTGACCGTGAAGAAGATCACGATAGGCACTCGTCGCAGGAAGCGGATTCTCCCAACAACAACATCGAAAACGAGTCCAAGAAGGTTCGCAGTGAATTGAAGCATAAAAAGTGGAGGCCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAGGATAAAGAACATCGGGAGAGGGAGAAAAGAAGTTGAAGATACTGATAAAGTCGGGGATGCGAACATGGCAGTTCCATTTTATGATGATAATTTGTACACCCTGAATGTGAAGAATGATCAAGATGCTAAGGCATCAGAATTATTTCCTTCAGTTGAAAGCCTAACTGCTGCAACTAAAGATTCCCTTCCTCCGTCATCTGTACTTAAGCAATTGGCTGTAGCTGTTGAGGCTGGAAGTAAAGTGAAGTCAATGAAAGAATTTATAGCTTCATCAGGAGGTTCTTCACCTGCTAAAGAGAGGGCAGGGTTGAGTCTCTCTGCTGTTAAGGCGTTAGTGCTACGTGAAAAGGAGGATGGTCAGATTTCGGACTTTACTAGCAATGAGAAAGTTGTGCAGTTAATCAGTTCTTTGTTTGATCCAGAGGGAGATTTCCTTACAAGAAAGATCAACTCTAATACAGAGGAAACTGCTATGACATCTTTGCCTAGAGATATTCATGGTGCTCCTCCTGAAAGTCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAGGACTGTCCGTAAAATGGCTCTTTTCTGGTGCTGTGTTGTTGCTGAAGTAAGAAAACTTTGGTCTGAGGAGAAACACTTACCAGGAGTTCCCAAGAACGAGATTCCTGATTTGAATTCATGTCTTCTATATCAACATTTTCAATTAATTAATTGCTGCATTTCTCGGAAAAGGTTCCGTGTTGTTGCCACTGAATCTCTAGACTCTATGATGATGCAAGCTAGCTCAGATACAAAAGAATCATCTGATTATAATGCTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTAAACAGTGGGGAGCTTGTTCTACGACTTGGTGCAAATCATCTTGCCGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTACTCTCCGGTCACCCAGGAAGGACCTTTGCTTACTGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACTGGGAGTGTTGGAGCTGGGTGCTCTCAATTGCTCTCAGATATGCAAGCTTTCAAGGCTGCAAATCCTGGATGTATTTTAGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGACAATGAGGCAAGTGTAGAGGATAGTGATGTTTTTGATAGTGGTGAATCATTGTCTGCCAAAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCAAAACCAGTACCAGCTGTTAAGCAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCTTTTGAGGACATCCATCCTTCTGATCTTTTTGTACAGCTGTTTGTTTCTTTGCTTGGTTTAGGATTTGCAATTGCTGAACCTATGCTGTCTAGTAATAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTGCCGCTTGTCAAAGCAACAAATTGCACGAGAAAGTTGATGATCTTTTCCAGGCATATGAAACAGTGGAGAGAATGTTATTAAATCCTGAAGAAGCACTAAAGATGATTAAGCAGACAGAAGAATCAACTATGGTTACTGATGAACCAAAGAGCCCGTTGAAGAGGCTTAGACTTATCTTTGCCGGCAAAGATAAACTATTGAGGAAGTCTCTCTCAAAAGATCAGTTAAATGATGAAGAAAAACCTGGTCGGCAATCATTCTCAAGTTTCTTTGATAGCAAGTCATCTTTGTTTTCAAAGAAGCCTCCAAAGTCTGGATCTCCATCCCCTTCTGAGAAATCTTCTCTCGATGTTGGTTGGACGGTTGCATAG 2100 0.4262 MEEHTFVSKARFAFHSAAAKAERVLMDFKSDRALTQFVDREEDHDRHSSQEADSPNNNIENESKKVRSELKHKKWRPPHIGIKQDWQDRIKNIGRGRKEVEDTDKVGDANMAVPFYDDNLYTLNVKNDQDAKASELFPSVESLTAATKDSLPPSSVLKQLAVAVEAGSKVKSMKEFIASSGGSSPAKERAGLSLSAVKALVLREKEDGQISDFTSNEKVVQLISSLFDPEGDFLTRKINSNTEETAMTSLPRDIHGAPPESLVVKLAEILGNYRTVRKMALFWCCVVAEVRKLWSEEKHLPGVPKNEIPDLNSCLLYQHFQLINCCISRKRFRVVATESLDSMMMQASSDTKESSDYNAGAPASPVLYARLNSGELVLRLGANHLAGDMTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASVEDSDVFDSGESLSAKGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIHPSDLFVQLFVSLLGLGFAIAEPMLSSNSDFSKLFYDCKEYIIAACQSNKLHEKVDDLFQAYETVERMLLNPEEALKMIKQTEESTMVTDEPKSPLKRLRLIFAGKDKLLRKSLSKDQLNDEEKPGRQSFSSFFDSKSSLFSKKPPKSGSPSPSEKSSLDVGWTVA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01192 699 MobiDBLite consensus disorder prediction 649 699 - -
Vian7g01192 699 MobiDBLite consensus disorder prediction 40 72 - -
Vian7g01192 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 51 688 IPR045700 GO:0005096|GO:0043547
Vian7g01192 699 Pfam Rab3 GTPase-activating protein catalytic subunit 379 531 IPR026147 -
Vian7g01192 699 MobiDBLite consensus disorder prediction 658 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01192 Vian-Chr7 20188863 20196927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01192 K18270 - gmx:100818643 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01192 7 20188863 20196927 Vian7g01192 7 20188863 20196927 ECH
Vian6g00389 6 16773940 16783274 Vian7g01192 7 20188863 20196927 PCT