Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01186 ATGAAAACATTCAACAAATTTGAAGTTGTAATGCTCTTTGTTCTTGCTCTTCTGCTTGGGATCACACCCTTGTTACCTTCTTCTCTGAGGCCAACCTTCCTTTACTTCATCTTCAACGTTCTCATCGTTGCACTAGGAGCAGAAGCTGGTCTTCTCTCAGTTTTTTCCAACCCTTTAGAAGACACAAAGCAACATCTTTCTGTCACCCAGAAACCTGTAACTCCCCCAGAAGTGTATGAACCTCAAGAGGAAAAGGAAGAAGCATTCAACATAACAGGTGGAAGTGGTGCCTCAGACCACAGTGAAAGGAAGGCTAAGGTTGTTGATGTGCTTGCTTCTGATGAGAAGATTGTTGCTGTCAGTGAAGTGGATGAGGTGAAAAACCCTAGTTCAATGCCAAATCTTTTGATCATTGGAGGTGGAGAAAATGAACAGATTGAAATAGCTAATGAGCAAGAGTTGTTTGACAAAGCTGAGGCCTTCATTGGGAACTTCTACAAACAGTTAAAGATGCAGAAAGAGATCTATCAGGAAGCCTTTTAG 543 0.418 MKTFNKFEVVMLFVLALLLGITPLLPSSLRPTFLYFIFNVLIVALGAEAGLLSVFSNPLEDTKQHLSVTQKPVTPPEVYEPQEEKEEAFNITGGSGASDHSERKAKVVDVLASDEKIVAVSEVDEVKNPSSMPNLLIIGGGENEQIEIANEQELFDKAEAFIGNFYKQLKMQKEIYQEAF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01186 180 Pfam Cotton fibre expressed protein 152 176 IPR008480 -
Vian7g01186 180 PANTHER OS01G0532300 PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01186 Vian-Chr7 20158371 20158913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01186 - - vra:106764543 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00393 6 16965300 16965824 Vian7g01186 7 20158371 20158913 PCT