Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01160 ATGGCAGTGACAGAGGCTCAAAATCCTCTTCTTGGGGAAAACACCTGTGGTTCCTTGTTAAAAAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAGCAACGAGACAAAATGCTTCTTCAGTTAGAACAGGAATGCTTGGATGTGTACAAGAGAAAGGTTGAGCAGGCTGCGAAATCAAGGGCACAGTTACTTCAAGCTTTGTCAGATGCTAAGCTTGAGCTTTCCAGTCTTCTATCAGCACTTGGAGAAAAGAGCTTTGCTGGAATTCCTGAGAACCCTTCTGGAACTATCAAAGAACAGCTTGCAGCTATAGCACCTGTACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATTAAGGAGTTCTCTGATGTACAGTCCCAGATCCAACAAATATGTGGAGAGATAGCTGGGAACTTAAACCTTAGTGATGCTTCGCCTGCTGTTGACGAGTCTGACCTCTCCCTCAAGAAATTAGATGAATATCAATCTGAGCTACAAGAACTTCAAAAGGAAAAGAGTGAGAGATTGCACAAGGTTCTTGAATTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGCATGGACTTCTTCAGTACTGTAACGGAGGTACATCCAAGCCTAAATGATTCTACTGGTGTTCAATCCAAGAGCATAAGTAACGACACCCTAGCTAGGTTGGCCAAGACTGTCTTAACGCTGAAAGAAGATAAAAAACAGAGGCTGCAGAAGCTTCAAGAATTAGCTTCTCAATTGATTGATCTTTGGAATCTAATGGACACTCATCCAGAGGAAAGGAGTCTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACTGTCCCTGGTGCTCTTGCTTTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGTAGGATGAAGGAAATTGCTTTCAAGAAGCAAACGGAGCTTGAAGAGATATTTGCCCGTGCTCATGTAGAAATAGACCCAGATGCTGCACGGGAGAAGATTATGGCATTGATTGATTCAGGAAACGTTGAACCAGCTGAATTACTGGCTGACATGGACAATCAGATAGCAAAAGCAAAAGAAGAATCTTTAAGTCGAAAAGATATATTGGACAAGGTTGAAAAATGGATGTCAGCATGTGAAGAGGAGAGTTGGCTTGAAGACTATAATCGGGATGATAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATATTGGTCAACAAAATTCCAGCTTTGGTCGATACATTAGTTGCTAAAACTCGTGCATGGGAAGAAGATCATGGCATGTCATTCACATATGATGGCGTTCCTCTTCTTGCTATGTTAGATGAATATGCCATGCTCAGGCATGAACGGGAAGAGGAAAAACGGAGGATGAGGGATCAGAAAAAGCACCACGAGCTACGAAACACAGAACAAGAAGCCATCTTTGGCTCAAGACCCAGTCCTGGTAGGCCAGTTAGTTCTGGTAAGGTAGGAGGTACTCGTGCTAATGGAGGAGCTAATGGTACACCAAACCGACGGCTGTCACTTAATGCTCATCAAAACGGAAGCAGGTCCACAACAAAAGATGGAAAAAAAGACATCAGACCAGTTGCTCCTGTGAATTATGTGGCCATATCAAAAGAAGATGCTGCTTCCCATGTTTCTGGTACCGAACCAATCCCGGCATCACCCTAA 1749 0.434 MAVTEAQNPLLGENTCGSLLKKLQEIWDEVGESDEQRDKMLLQLEQECLDVYKRKVEQAAKSRAQLLQALSDAKLELSSLLSALGEKSFAGIPENPSGTIKEQLAAIAPVLEQLWQQKEERIKEFSDVQSQIQQICGEIAGNLNLSDASPAVDESDLSLKKLDEYQSELQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKQRLQKLQELASQLIDLWNLMDTHPEERSLFDHVTCNMSASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQTELEEIFARAHVEIDPDAAREKIMALIDSGNVEPAELLADMDNQIAKAKEESLSRKDILDKVEKWMSACEEESWLEDYNRDDNRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGMSFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKHHELRNTEQEAIFGSRPSPGRPVSSGKVGGTRANGGANGTPNRRLSLNAHQNGSRSTTKDGKKDIRPVAPVNYVAISKEDAASHVSGTEPIPASP 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01160 582 Coils Coil 298 318 - -
Vian7g01160 582 MobiDBLite consensus disorder prediction 522 542 - -
Vian7g01160 582 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 13 569 IPR007145 GO:0000226|GO:0008017
Vian7g01160 582 Coils Coil 49 76 - -
Vian7g01160 582 FunFam 65-kDa microtubule-associated protein 6 369 502 - -
Vian7g01160 582 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 504 - -
Vian7g01160 582 Coils Coil 461 488 - -
Vian7g01160 582 MobiDBLite consensus disorder prediction 476 496 - -
Vian7g01160 582 Gene3D - 368 502 - -
Vian7g01160 582 Coils Coil 155 182 - -
Vian7g01160 582 MobiDBLite consensus disorder prediction 476 554 - -
Vian7g01160 582 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01160 Vian-Chr7 19867108 19870834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01160 13 544 EF-hand Containing Proteins AT5G62250 42.329 4.75e-123 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01160 K16732 - gmx:100806071 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01160 7 19867108 19870834 Vian7g01160 7 19867108 19870834 ECH
Vian6g00413 6 17834652 17842440 Vian7g01160 7 19867108 19870834 PCT