Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00413 ATGGCGGCTATGGATGGTCAAAATCCTCTTCTTGATGAAATCACCTGCGGTTCCTTGTTATATAAGCTTCAGGAAATATGGGATGAGGTTGGTGAGAGTGATGAAGAGCGAGACAAGATGCTCCTTCAGATAGAGGAAGAGTGCTTGGATGTGTACAAAAGAAAGGTTGAGATGGCTGCTAAGTCAAGGGCACGGTTACTTCAATCCTTGTCTGATGCTAAGCTTGAACTGTCTAGTCTTTTATTGGCTCTTGGTGAAAACAGTTTCACTGGAATGCCTGACAAGACTTCAGGTACTATTAAGGAACAACTTGCAGCCATAGCACCAATACTTGAACAGCTTTGGCAACAAAAAGAGGAAAGAGTAAAGGAGTTTTCAGATGTACAGTTACAGATCGAACAAATATGTGGAGAGATAACTGGGGACTTGAACCCTGATCAGACTGGATCAGGATCATTTACAGTTGATGAGTCTGACCTTTCCTTGAAGAAGTTGGATGAATATCAAGCCCAATTCCAAGAACTGCAAAGGGAAAAGAGCGAGAGGTTGCAGAAGGTTCTTGAATATGTGAGTACAGTGCATGATCTATGTGCTGTCCTTGGCATGGACTTCTTTAGTATTGTCACTGAAGTTCATCCAAGCTTAAATGATGCTGTAGGTGTTCATTCCAAAAGCATAAGCAATGGCACACTAGCTAAACTGGCTAAGACCGTCTCTTCCCTGAAAGAAGATAAAAAGCAGCGGCTACACAAGCTTCAAGAATTAGCTTCTCAGTTGATTGATCTGTGGAATCTAATGGATACCCCTACCGAGGAAAGGAGACTATTTGACCATGTTACTTGTAATATCTCAGCTTCTGTAGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTAGATTTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGTAAGATGAAAGAAATTGCTTTCAAGAAGCAAGACGAGCTTGAAGAGATATATGCCCGTGCTCATGTAGAAATAAACCCTGAAGCTGCTCGAGGGAATATTTTGTCATTGATTGACTCTGGAAACATTGAACCATCTGAATTACTGACTGACATGGATAATCAGATAGCTGCAGCAAAAGAAGAAGCTTTAAGCAGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCTGCATGTGAAGAAGAGAGCTGGCTTGAAGACTATAATAGGGATGAAAACAGGTATAGTGCAAGTAGAGGTGCACACATAAACCTCAAACGTGCTGAGAAAGCTCGAATTCTGGTCAGCAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGCACTTGGGAAGAAGTACACAACATGTCATTCACATATGATGGTGTTCCTCTCCTTGCTATGCTGGATGAATATGCCATGCTGAGGCATGAACGACAAGAGGAAAAACGAAGGATGAGGGCAAGTTTCAATGATGACCAGAAAAAGTACTATGAACAGCAAACCACAGATCAGGAATCTGTGTTTGGTTCAAGACCTAGTCCTGCAAGGCCACTTGGCAACAAGAAGGTAGTTGGCCCTCGACCAAACGGTACTCCAAATAGACGGTTATCTCTTAATGCTCATCAAAATGGAAGCAGGTCCACAGCAAAAGATGGAAAAAGGGATAATACTAGACCAGTTGCTCCCCTTAACTATGTATCAATGTCAAAAGAAGATGCTGCTTCCCATGTTTCTGGTACTGAACCAGTTCCAACATCACCCTAG 1764 0.4229 MAAMDGQNPLLDEITCGSLLYKLQEIWDEVGESDEERDKMLLQIEEECLDVYKRKVEMAAKSRARLLQSLSDAKLELSSLLLALGENSFTGMPDKTSGTIKEQLAAIAPILEQLWQQKEERVKEFSDVQLQIEQICGEITGDLNPDQTGSGSFTVDESDLSLKKLDEYQAQFQELQREKSERLQKVLEYVSTVHDLCAVLGMDFFSIVTEVHPSLNDAVGVHSKSISNGTLAKLAKTVSSLKEDKKQRLHKLQELASQLIDLWNLMDTPTEERRLFDHVTCNISASVDEVTVPGALALDLIEQAEVEVERLDQLKASKMKEIAFKKQDELEEIYARAHVEINPEAARGNILSLIDSGNIEPSELLTDMDNQIAAAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYSASRGAHINLKRAEKARILVSKIPALVDTLVAKTRTWEEVHNMSFTYDGVPLLAMLDEYAMLRHERQEEKRRMRASFNDDQKKYYEQQTTDQESVFGSRPSPARPLGNKKVVGPRPNGTPNRRLSLNAHQNGSRSTAKDGKRDNTRPVAPLNYVSMSKEDAASHVSGTEPVPTSP 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00413 587 Gene3D - 372 510 - -
Vian6g00413 587 MobiDBLite consensus disorder prediction 482 587 - -
Vian6g00413 587 MobiDBLite consensus disorder prediction 532 546 - -
Vian6g00413 587 Coils Coil 242 262 - -
Vian6g00413 587 Coils Coil 158 185 - -
Vian6g00413 587 Coils Coil 301 321 - -
Vian6g00413 587 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 574 IPR007145 GO:0000226|GO:0008017
Vian6g00413 587 MobiDBLite consensus disorder prediction 482 499 - -
Vian6g00413 587 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 514 - -
Vian6g00413 587 MobiDBLite consensus disorder prediction 571 587 - -
Vian6g00413 587 FunFam 65-kDa microtubule-associated protein 6 372 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00413 Vian-Chr6 17834652 17842440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00413 13 548 EF-hand Containing Proteins AT5G62250 41.682 6.25e-122 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00413 K16732 - cave:132173906 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00413 6 17834652 17842440 Vian6g00413 6 17834652 17842440 ECH
Vian6g00413 6 17834652 17842440 Vian7g01160 7 19867108 19870834 PCT