Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01155 ATGACATCCTCAACCTGTTTCCTTCTTTTATTCCTTCTGCTCCTTTCATCCTCCACGAGTGGTGTTCAACATCATGAAGAGGGTTTCATCTCTATCACCATATCTGATAAGGGTCTCGATTTTGCCAAGGATATTCTGATAGACCAAGCTGTTGACTCTATTACTCTGTCTCAATTGCCAGATATTGAGGAGACTGTTCAAGTCCCTCTTGTTGGAAAAGCCAGAGTTGTTCTTTCTGAAATCACTATCAATGATATCCAAGTAAATTCTTCATCTGTTAATACAGGAGAAACAGGCATTGCTGTTGTTGTTTCAGGTGCCACAGCTAACTTGAGTTTGAAGTGGAGGTACTCTGCCAGCAGTTGGTTAGTCCCAATTGGAATTTCTGATAGTGGAACTGCAACTGCAAAGGTTAATGATTTGCAAGTTGGACTTACTGTGAATTTAACGAATCAAGAAGGAACTCTTAAGCTGCTTCTCCTGGATTCTGGATGCCATGTTAGAGATTTATCCATAAAGTTACATGGTGGAGCAGCTTGGCTTTACCAAGTGCTAGTAGATGCTTTTGCAGGAAGTATAGCATCTGGAGTTGAAGAGGCAGTTTCTGATCAAATAAATGAGGGGATATCAACTCTTGATGTTTTGTTACAATCTCTTCCAAAGACTTACCCAATAGACGAAACAGCTGCTCTAAATGTTTCTTTCGTGAACAATCCTGAACTAAGTGATTCTGCTATTGAATTAGAAATTAATGGTTTATTCATAGGAAGGAATGAAATTTTGTCACCTCAAGGTTACCACAGAGGTTCAGACGTTTCTGTTTCCCGTGCCAACCCTTCGCCAAAGATGATAACAATTTCATTACATGAAAATGTTTTCAAATCCGGTTCCTTGGTTTACTTCACTGCAGATACTTTGAAATGGACTGTTGATGAACTGCCTGATCAGAACCTTCTGAACACTGCTGAATGGAGATTCCTTATTCCTCAGTTATACAAGCAATATCCAAACGATGACATGAATCTTGATGTCTTTGTGTCTTCTCCACCGGATATACAAGTGACAAACAAAGATGTTGGTGTCCAAATTTCCATAGATATAATACTTAATGTTCTGGAAGCTGGTGAAGTCGTACCTGTTGCATGCATCTCGGTGGATTTTAGTGCATCCTGTGCTGCGGAGATCATAGGAAACAATCTTGCTGGTTGGCTTAAATTGAAAAAGTTTTCGACATACTTGAAATGGAGTAAAATAGGGAAACTGCACGTGAATCTGATTCAGTCAGTGACATCAGCTGTCCTCAAAACCGTTCTCATACCATACCTGAACTCACAGTTAGTGAGGGGAATTCCACTGCCAATTCTTAATGATTTTGCTCTTGAGAATGCTCGTATATTGTATGCTCCCCCATGGATTACTGTGTCCAGTGATGTTTCTTTCTTCGGACAATATCATCACAAGCATCTACCAGCTTATGTATCATAA 1485 0.398 MTSSTCFLLLFLLLLSSSTSGVQHHEEGFISITISDKGLDFAKDILIDQAVDSITLSQLPDIEETVQVPLVGKARVVLSEITINDIQVNSSSVNTGETGIAVVVSGATANLSLKWRYSASSWLVPIGISDSGTATAKVNDLQVGLTVNLTNQEGTLKLLLLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGSIASGVEEAVSDQINEGISTLDVLLQSLPKTYPIDETAALNVSFVNNPELSDSAIELEINGLFIGRNEILSPQGYHRGSDVSVSRANPSPKMITISLHENVFKSGSLVYFTADTLKWTVDELPDQNLLNTAEWRFLIPQLYKQYPNDDMNLDVFVSSPPDIQVTNKDVGVQISIDIILNVLEAGEVVPVACISVDFSASCAAEIIGNNLAGWLKLKKFSTYLKWSKIGKLHVNLIQSVTSAVLKTVLIPYLNSQLVRGIPLPILNDFALENARILYAPPWITVSSDVSFFGQYHHKHLPAYVS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01155 494 PIRSF Lipid_binding_protein 5 485 IPR030675 GO:0005615|GO:0008289
Vian7g01155 494 SMART bpi2_2 278 476 IPR001124 GO:0008289
Vian7g01155 494 Gene3D - 37 217 - -
Vian7g01155 494 Pfam LBP / BPI / CETP family, N-terminal domain 38 212 IPR017942 GO:0008289
Vian7g01155 494 Gene3D - 31 465 - -
Vian7g01155 494 PANTHER OS06G0309200 PROTEIN 6 490 IPR045897 -
Vian7g01155 494 Pfam LBP / BPI / CETP family, C-terminal domain 279 478 IPR001124 GO:0008289
Vian7g01155 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 480 IPR017943 GO:0008289
Vian7g01155 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 32 242 IPR017943 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01155 Vian-Chr7 19835274 19838271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01155 K05399 - gmx:100804747 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01155 7 19835274 19838271 Vian7g01155 7 19835274 19838271 ECH
Vian6g00414 6 17897439 17900589 Vian7g01155 7 19835274 19838271 PCT