Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01137 ATGGAATCCCCACAGTCTGTTGTGTCACCATTCAAGAACTCTGTCTTGGGTGAGGCTGAGAAGTACAAGTCTGATATTTACAAGCAAAGCTCGGGTCCTTTCTCTAAGGACATTGAAGTCAATGGAAAGGAAGCTGTCAGGTCCAACTCAGAGGAGTTCATTGGTGCTGTTGATGTTTACATTCATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAAATTAGCCTGACTAGTAATCCCGAGAATACCGTCTCTACCAAGACCATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGAGAATCTTCGTCTAAGCGTCAGGACAGTTGATTCTGCTGTAAAATGTGAAATCTGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAATTGCTTGGCTTTGCTTTGGTGCCTTTGTCAGAAGTGCTGATGAAGGACGGCAAACTAGAGAAAGAGTTCTCTCTTTCCTCAACTGATCTATTCCATTCACCGGCCGGTTTTGTGCAGTTGTCTCTTGCATACACTGGCACTTCGCCTGATGTTATTGCAATTTCTGCAATGCCTACTGAGTTGGCTGCAAATGGCACTGACAAGGACTCTGAAACTTGCGAATCACTGGTCAGAGATTTAGACAAGATTGAATTCCCGGATCCAAAAATTGTAAATGAAGACCACTTGATGGTTTCAGAATACTTAAGTATTCCATGTGAGGACAGTCAGTGTTCTGCCAGCTTGACCACCAATGATACTGAAAATCTGAGTTCTGAAGCAGGTGTTCAGCTTGTGGAGAGCTTCTCAGCATGCAGTGTTGAGTCTGCACAACCTCCTAAGGTTGATTCACCACCTACAAGTGTGTCAACAGATGGAGTTTCATCTCCTTCAGTGGCTGCAAGCTCAGGCTCATCTGATGCTGCTGCTGCTGTTGCTGCTGCTTCCAAGTCTCCAAATCAGGAACAAGTTTCGGCCAACAAAGAGAAAAATGGGGAGGACAACAATGGTGAGACTGATTCCTCAAATGGGGTGGTGAAGGAGTCATTCCCTAAGCCTGTTGTGACCGTTAACATCGAGCCTGAGTCAAATGTGGTGCAGCAGGACATAGTCGACATGTACATGAAAAGCATGCAGCAGTTCACAGAGTCGTTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCCGAACAGAAGATACAGACACCAAAGAGCTCTAACTCCCGTGTGTTTTACGGCAGCAGGGCTTTCTTCTGA 1299 0.4519 MESPQSVVSPFKNSVLGEAEKYKSDIYKQSSGPFSKDIEVNGKEAVRSNSEEFIGAVDVYIHQARDIHNICIYHKQDVYAKISLTSNPENTVSTKTINGGGRNPVFNENLRLSVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLMKDGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGTSPDVIAISAMPTELAANGTDKDSETCESLVRDLDKIEFPDPKIVNEDHLMVSEYLSIPCEDSQCSASLTTNDTENLSSEAGVQLVESFSACSVESAQPPKVDSPPTSVSTDGVSSPSVAASSGSSDAAAAVAAASKSPNQEQVSANKEKNGEDNNGETDSSNGVVKESFPKPVVTVNIEPESNVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKIQTPKSSNSRVFYGSRAFF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01137 432 SMART C2_3c 56 159 IPR000008 -
Vian7g01137 432 MobiDBLite consensus disorder prediction 280 353 - -
Vian7g01137 432 Gene3D C2 domain 51 198 IPR035892 -
Vian7g01137 432 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 51 185 IPR035892 -
Vian7g01137 432 CDD C2 57 163 - -
Vian7g01137 432 PANTHER EXPRESSED PROTEIN 1 432 - -
Vian7g01137 432 MobiDBLite consensus disorder prediction 280 309 - -
Vian7g01137 432 MobiDBLite consensus disorder prediction 400 426 - -
Vian7g01137 432 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Vian7g01137 432 Pfam C2 domain 56 161 IPR000008 -
Vian7g01137 432 MobiDBLite consensus disorder prediction 396 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01137 Vian-Chr7 19595009 19596307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01137 - - gmx:100781587 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01137 7 19595009 19596307 Vian7g01137 7 19595009 19596307 ECH
Vian6g00444 6 18657219 18658505 Vian7g01137 7 19595009 19596307 PCT