Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01134 ATGCAAACGTCGTCGAAGACCATCTCTGCGGCTCTGCAACTGGTGGACGCCAAGAAAGAGAATTTGAAGAAAGCCTACGACGATCTCCAATCCCATTCCTCTCTCCTCTCTTCCTCCTCCTTCCCTCTTTCTTGGTCGCAAATCGACTCCCACTTCACCTCCCTCCACAACTCCCTCTCTGAACGATTTCACCTTCTTCAGACCCTCGAATCCCAACAGCAGCACACTCACCCACCTTCCTCTCCCTCCAAAGATCCCACCTTTCCACCCTCCCGCTCCGACCCATCATCGCAAAACGACGTCACATTGCCCAAACCCCACGCGGAACGCATTATCGCCCTCTGCAGCAGCGTGGACGGAAAAGGGTTGCGGGACTACGTTGGGGATCATTTCAAAGACAAGGTTGCGTTCGAGGTTGACCTTCAGACTGCCCTCAAGCGTGCTTCCGATCCCGCTTCGATGATTCTCGATGCACTGGACGGTGTCGTGGGTGCGAATGTGGTGAAAGATGACAAGGAATTGCGCAAAAGGAAGCGGACTTGTGGGTTCTTGTTTCAGCAGTTGAGGGCTGCGTCCGTTCATGTGAGTTTTAAGGTGCTTAAGAGAGCAAGGAGGTTGTGTGTGGAGTGGAAGGGGAGCTTGCCCAGTGAAGGTGGTGAAGGTGTTGGGGCCATGACTTTCTTGCAGTTTGTGGCGGCTTATGGGTTGTTATCTGAATTGACAGATAATGAGATTCTCACTTTCTCTGCCATGGCTGCTGCTAATGATGATCTTCCCGAGCTCTACCGAAGTATCGGTTTAACGGAGAAAGTCCCAGGTCTTATTCAGAAACTTGTTGACAGGTGCAGACATATTCTGGCTGTCAAGTATATTTTTGAGTTCAATCTTGCGGATAAGATTCCACCGATTCCCATTTTGAAAGCTCACGTGAATGAATCTCAGAAACTTGCTAAAAAACTTTCTGAGGAAGGGAAGTCACTAAATGAAATCACAGCCAGAGAAGTCCATGCTCTGAAATCGGCAATCAAGGTTATTGAAAGTCATAATCTTCAATCGCAATATCCACCTGAAAGCCTTCAACAGCGTTTAGAACAATTGACGAAGCAAAAGGCAAATTTAAAATATGCTGCATCGGCTTTTTCTGCAAGGCCCCCCTCTCATCAGCAGCAACAAAGTGGGATCAAGCGTCCTCGAATTTCTGCCCCCATTGGTTCTGCAGCTGTCCTGAATAGTGTCGGTGGTGCCAGTTCAACTGCTCACCACTACAAACATCCTCATTTCCAGTCATCAGGTTTGTTGCCGGAGCAACGACCTTTTTTCCATTCACCAGGTTTGTTGTTGGAACAACAACCTCATTTTCAGTCATCAGGTTTGTTGCCTGATCAACAACCTCGTTTCCAGTCACCCGGTTTGTTGCTGGAACATCGAAGTCCCTACATTAACTTGCCAACCATGTCATATGGCATGAAGGCTCCAACCCCAACCATCTTGCCTTATACAGGCGCTGCAACTGGGCCTTATGGTCTTGATGATGTCCCAATGGGTTCCAGTGGTAACCTCGGTCAACGTGGTTCTCATCCAAATTCATCAGAGCCACTTATGCCGTCTGGTTATCATGATAGTGTCTCTGCCTATGGTGGTTATGGTCATCAGCGCTATCATCGAACATCTTATCCTCAGTAG 1683 0.4854 MQTSSKTISAALQLVDAKKENLKKAYDDLQSHSSLLSSSSFPLSWSQIDSHFTSLHNSLSERFHLLQTLESQQQHTHPPSSPSKDPTFPPSRSDPSSQNDVTLPKPHAERIIALCSSVDGKGLRDYVGDHFKDKVAFEVDLQTALKRASDPASMILDALDGVVGANVVKDDKELRKRKRTCGFLFQQLRAASVHVSFKVLKRARRLCVEWKGSLPSEGGEGVGAMTFLQFVAAYGLLSELTDNEILTFSAMAAANDDLPELYRSIGLTEKVPGLIQKLVDRCRHILAVKYIFEFNLADKIPPIPILKAHVNESQKLAKKLSEEGKSLNEITAREVHALKSAIKVIESHNLQSQYPPESLQQRLEQLTKQKANLKYAASAFSARPPSHQQQQSGIKRPRISAPIGSAAVLNSVGGASSTAHHYKHPHFQSSGLLPEQRPFFHSPGLLLEQQPHFQSSGLLPDQQPRFQSPGLLLEHRSPYINLPTMSYGMKAPTPTILPYTGAATGPYGLDDVPMGSSGNLGQRGSHPNSSEPLMPSGYHDSVSAYGGYGHQRYHRTSYPQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01134 560 Pfam Frigida-like protein 109 376 IPR012474 -
Vian7g01134 560 MobiDBLite consensus disorder prediction 70 103 - -
Vian7g01134 560 MobiDBLite consensus disorder prediction 510 560 - -
Vian7g01134 560 MobiDBLite consensus disorder prediction 518 536 - -
Vian7g01134 560 Coils Coil 12 32 - -
Vian7g01134 560 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 16 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01134 Vian-Chr7 19546991 19549445 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01134 - - var:108322861 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00449 6 18791012 18795275 Vian7g01134 7 19546991 19549445 PCT