Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00449 ATGGATACACTGAACACGATCGCAACGGCACTTAACCTGGTCGATTCCAAGAAAGAGAATCTGAAGAAAGCCTTCGATGATCTTCAATCCCTTCTCTCTCCTCTTCCTCTCGCATGGTCAGACCTCGATTCTCACTTCACCTCGCTCCACCACTCTCTCTCCCACCGCCTCCACCTCCTCCAATCCCAAACCCTAACCCTCACCACAACCCCAATTCCCGACCCACCTGCTCAAACCCCTAATGAAGCAAAATTTTCATCAAACCCTAAAAATTCATCATCGAATCATGACGAATCTTCACCTGGGGTGTCCCCCCAAAACGACGCCGTTCCAGGCCCGGTTGCACCTGGAAACGAATTGGTCGTTCTTTGCGAGAAAATGGACGGCGTGGGGCTGAGAAATTACGTCCATGACAATTTTTTGGACATGGCCAGGGTTCAGGCGGAGCTTCCCGGTGCGTTTCGCCATGCGCCGGACGCGGGTGTGATGGTTCTGGATGCGTTGGAGGGGTTTCATGGAGATGGTAGCGGATTGAAGAAATGGGAATTGAGGAATATGAGGAAGAGTTGTGTTGTGCTGTTGAGGCAATTCAGGGTTGCCGCTCTAAGTGTGAGTGCTGAGGCCAGTTTGAGAGCTGTGAAGTTGGCCCAGGCATGGAAGGAGAAGTTGGTGGGTGATGATAACAACGCGTTTGAAGCTTTGGGGCTTTTGCATTTGATTGCTGCATTTGGTTTGGTGTCTGAATTCAGCTGGGATGAGCTTGTTGACTTTTCGGTCGTGGCCCCCGCCAATGAGGAGTTCCCAGAGCTGTGCCGAGCTGTCGGGTTGACAGAGAAAGTTCCCGATATTGTTCAGAAACTTATAGATAAGGACAAACATATCCCTGCTGTCAAGTATATTCTTGAGTTTAATCTTGCTGATAAGATTCCACCTGTTCCTATTCTGGAAGCTGCTGTGGATGAGGCTAAGAAACTTGGTAGAAAACTTTCCGAAGAAGGAAATTCATCTAGTGAGAGTACTGCTAGAGAAATTCATACACTGAAATTGGTAATCAATATTATTGAGAATTTTAAGCTTGAAACTGAACACCTACGAGCCAGCGTTGAGCAGCGTATAGAGCAATTAAAGAAGCAGAAGACAAATAATAAACGATCTACTCCAGCACCTGCTTCAAAACCTCAACATAAGCAGCAACAACAACAGCAAAAGAGGAATATGCAAAAGCAGCAGCAGACTTGGATCAAGCATCCTCGAGCATCTGCTCCAGTTGTTGCTACAGCTGTCCTCAAGAATGCCAATTCAGCAATGCACCGCTACCAGCAAACTCGTGTCCATCCATCAGGTTTGTTTCCAGAGCATCCAAATCCCTATTGGAGCTCGCCAGCCGTGCCATCTGGCATGATGGCTTCTACCGCAAAATTTCTTCCATATGCAGGTCCTTCAGCCGGATCTTATTATGGCCATGATGGTGTCCCAATGGGTCCCCGTGGCAACCCCAATGTAAGAGTTTCTCATCTAAGTTCATCAGAGCCACAAGTGCCAACTGGTGGTTATTATGATAGAACCTCTACCTTTGGTGGTAGTGGTCTGCAACATCATTACCAAGCATCTTATTACCCTCAATAG 1626 0.476 MDTLNTIATALNLVDSKKENLKKAFDDLQSLLSPLPLAWSDLDSHFTSLHHSLSHRLHLLQSQTLTLTTTPIPDPPAQTPNEAKFSSNPKNSSSNHDESSPGVSPQNDAVPGPVAPGNELVVLCEKMDGVGLRNYVHDNFLDMARVQAELPGAFRHAPDAGVMVLDALEGFHGDGSGLKKWELRNMRKSCVVLLRQFRVAALSVSAEASLRAVKLAQAWKEKLVGDDNNAFEALGLLHLIAAFGLVSEFSWDELVDFSVVAPANEEFPELCRAVGLTEKVPDIVQKLIDKDKHIPAVKYILEFNLADKIPPVPILEAAVDEAKKLGRKLSEEGNSSSESTAREIHTLKLVINIIENFKLETEHLRASVEQRIEQLKKQKTNNKRSTPAPASKPQHKQQQQQQKRNMQKQQQTWIKHPRASAPVVATAVLKNANSAMHRYQQTRVHPSGLFPEHPNPYWSSPAVPSGMMASTAKFLPYAGPSAGSYYGHDGVPMGPRGNPNVRVSHLSSSEPQVPTGGYYDRTSTFGGSGLQHHYQASYYPQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00449 541 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 113 405 - -
Vian6g00449 541 MobiDBLite consensus disorder prediction 374 418 - -
Vian6g00449 541 Coils Coil 358 385 - -
Vian6g00449 541 MobiDBLite consensus disorder prediction 491 524 - -
Vian6g00449 541 MobiDBLite consensus disorder prediction 381 416 - -
Vian6g00449 541 MobiDBLite consensus disorder prediction 501 524 - -
Vian6g00449 541 MobiDBLite consensus disorder prediction 80 106 - -
Vian6g00449 541 Pfam Frigida-like protein 117 386 IPR012474 -
Vian6g00449 541 MobiDBLite consensus disorder prediction 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00449 Vian-Chr6 18791012 18795275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00449 - - gmx:102669439 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00449 6 18791012 18795275 Vian6g00449 6 18791012 18795275 ECH
Vian6g00449 6 18791012 18795275 Vian7g01134 7 19546991 19549445 PCT