Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01100 ATGAGGAGTGGTGAACAGCAGTCATTGTTCGAGACTAGGAAAGACAGAACAAGACACATTCGGAGGCTCTATACGGTGTCTGTGTTTGTGGCCACATGCTTTGTCTGGGCATTTAGACTCACCCACATACCCGCAAATGGGGAAGCTCGCCAATGGGCATGGTTTAGTTTGTTTCTTGCAGAACTGTGGTCTGGCATCTATTGGCTCTTTTATCAAGTCCTCCGCTGGAACATGGTCTTCAGAACAACCTTCCCCAACATACTCTCTGAAAGATACGAGAGTAGGTTGCCGGGAGTGGACATCTTTGTGTTCACGGCGGATGCTGTGGTGGAGCCACCGCTGATGGTGATTAATACGGTGCTATCTGTGATGGCTTATGACTATCCGGCTCAGAAGTTGAGCGTGTATGTCTCAGACGATGGGTGTTCGGAGATAACCTTTTATGCACTTTTAGAAGCTTCTTCCTTTGCCAAGCATTGGGTTCCATTCTGCAAGAGATTTAAGCTGGAACCGAGGTCACCTGCTGCCTTTTTCAACAACACTCATGCCTCAACAAAATCACATGATCATATCTATGTCAAACACTTGGCAACCATCCGTAAACTATACGAAGAAATGAAAAGGCGAGTAGAAGATGCAACCAAGTTGGGTGTACCCAGTGAAGCACGCTCAAAGCATAATGGGTTTTCCCAATGGGAGAATTCATATACCTCACGACGTGATCACGACACCATCCTTCAAATAGTTCTGCATAAGAACGATTTGCATGGGTCAAAGGATGAAGATGGATGTATTCTGCCAACATTAGTGTATATGGCTCGTGAAAAGAGACCTCAGTATCATAGCCACTATAAAGCCGGAGCTATAAATTCATTGGTAGCATACTTAATTACAACCCTTTCATTTCTTAAAGAAAAATCTGCATGGAGCATGCATCTCAATCTAAGAATATCGTCAAAGATTAGCAGAGGGAAAATCATTCTATTTCTGGATTGTGACATGTATTCAACAAATTCACAATCGGTGAGAGATGTTCTATGTTTTTTCATGGATGAGCATAAAGGCCAAAGAATTGGTTATGTGCAATTGCCACAATATTTTGACAACATTGGTCAGAATGATCTGTACGGGAATGCTCTATCAGAAACTATGCAGATACACCTCCATGGTGAAGATGGTCTGGGTGGCCCTTTGTGCATTGGAACTTGTTGCTTTTTCAGAAGAGATGCTCTTTGTGGGAAGAAGTTTAATAATCAAGAAGAAAATGGTTGCAATGATGAGAGCGAGAAAGAAGTGGTTGAAGTAAACATGCAAAGAATAGAAGAAGAAGGAAAAGCTTTAGCAAGTTGCACCTATGAGAAAAATACTCTGTGGGGGAAAAAGATTGGTCAAGTATATGGATGTCTTGTGGAGGATGTGATAACAGGGTTTCGGATACATTCACAGGGATGGAAATCAGTGTGTTACAATCCTCCAAGAAAGTGTTTTTTAGGTGTTGCACCAACCAACTTGCTTCATACACTTGTTCAACAGAAGAGATGGGCACAAGGTGACTTACAAATTTTGTTATCTGAGTTCAGACCAACATGGTACGGTGATGGAAAGATCAATTTATTCCTACTATTGGCATATGAGTACACTATGTGTTTTGCAACCATTTCCTTGCCAATACTATATTACTCCATCATCCCTTCACTTTATCTCCTTAAGGGCATTCCCTTGTTTCCAAAGATGTCAAGCTCATGGTTGATACCATTCGTGTATGTCATTGTGGGGGAAACTATTTATAGTTTGGTTCAAAGTTTGAGTATGGGAGGATCAATCCAAGGTTGGTGGAATGCTATAAGAATATGGTTGTACTTGAAAACAAGTGCCTTTTTCTTTGCCTTCGTAGACGGCATCTTGGGATTCTTTGGATATTCAAATTCATCCTTTGTAGTCACAGCAAAGACCATAGAAGATGATGCTGCACAACGTTACGAGAAAGAGATCATGGAGTTTGGAAGCTCTTCTCCTTATTTCACTGTTCTAGCAACACTTGCATTGCTCAATCTGTTTTGTTTGCTTTCAACTTTAAAGGATTTTGTCCTTGCCAAAAGTGCTTTTGCTGGAGAGAAAATGGCACTACAAGTTCTTTTGTGTGGAGTTTTGGTTGTCATCAATTCTCCCATATACCAAGCCATTTTTCTGAGGAAAGATAAAGGTAGAATTCCAACCTCTCTATCTGTTAAGTCTACTGCATTGGCTTTCACTGCATGTGTCTTCTTCAAACTGTTCAATTGA 2283 0.4117 MRSGEQQSLFETRKDRTRHIRRLYTVSVFVATCFVWAFRLTHIPANGEARQWAWFSLFLAELWSGIYWLFYQVLRWNMVFRTTFPNILSERYESRLPGVDIFVFTADAVVEPPLMVINTVLSVMAYDYPAQKLSVYVSDDGCSEITFYALLEASSFAKHWVPFCKRFKLEPRSPAAFFNNTHASTKSHDHIYVKHLATIRKLYEEMKRRVEDATKLGVPSEARSKHNGFSQWENSYTSRRDHDTILQIVLHKNDLHGSKDEDGCILPTLVYMAREKRPQYHSHYKAGAINSLVAYLITTLSFLKEKSAWSMHLNLRISSKISRGKIILFLDCDMYSTNSQSVRDVLCFFMDEHKGQRIGYVQLPQYFDNIGQNDLYGNALSETMQIHLHGEDGLGGPLCIGTCCFFRRDALCGKKFNNQEENGCNDESEKEVVEVNMQRIEEEGKALASCTYEKNTLWGKKIGQVYGCLVEDVITGFRIHSQGWKSVCYNPPRKCFLGVAPTNLLHTLVQQKRWAQGDLQILLSEFRPTWYGDGKINLFLLLAYEYTMCFATISLPILYYSIIPSLYLLKGIPLFPKMSSSWLIPFVYVIVGETIYSLVQSLSMGGSIQGWWNAIRIWLYLKTSAFFFAFVDGILGFFGYSNSSFVVTAKTIEDDAAQRYEKEIMEFGSSSPYFTVLATLALLNLFCLLSTLKDFVLAKSAFAGEKMALQVLLCGVLVVINSPIYQAIFLRKDKGRIPTSLSVKSTALAFTACVFFKLFN 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01100 760 SUPERFAMILY Nucleotide-diphospho-sugar transferases 116 571 IPR029044 -
Vian7g01100 760 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 248 426 IPR029044 -
Vian7g01100 760 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 193 IPR029044 -
Vian7g01100 760 Pfam Cellulose synthase 99 294 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian7g01100 760 Pfam Cellulose synthase 303 421 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian7g01100 760 Pfam Cellulose synthase 442 755 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian7g01100 760 Coils Coil 196 216 - -
Vian7g01100 760 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01100 Vian-Chr7 19214438 19218535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01100 1 753 Glycosyltransferase AT1G55850 49.671 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01100 - - gmx:112999362 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01100 7 19214438 19218535 Vian7g01100 7 19214438 19218535 ECH
Vian6g00499 6 20059798 20065456 Vian7g01100 7 19214438 19218535 PCT