Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00499 ATGGAGGATGGCGTCGCTGCAGGGGAGCTTGTGATTCTAGGAATGCCATGGATGACTCGCGAGGAAGAAGAAAGGGCTTCGTTAATTAGCCATATCAAAGATGCAAAAGGTGAACATGGCAAATGGGTATGGCTTGGTATGTTTTGTGCTGAATTGTGGTTTGGCTTTTACTGGGTTCTCACTCAGGCCTTCAGATGGAACCTTGTGTTCAGACAACCCTTCACAAACAGACTTTCTCAGAGATATGAGAAAAAGTTGCCGGGAGTGGACATATTTGTGTGCACAGCAGACCCTGATATTGAGCCACCAAAGATGGTGATTAACACAGTGCTATCTGTTATGGCTTATGACTATCCAACTGAGAATTTGAATGTGTATCTCTCTGATGATGCTGGGTCTCAAATCACGTTCTATGCTCTATTGGAGGCATCAAACTTTGCAAAACATTGGATTCCATTTAGCAGAAAGTTCAAAGTGGAGCCAAGGTCACCAGCTGCATATTTTAAGAGTATAGTCTCATCAGGTTACTCTGCTGATTCTGATCAAGTCAAAGAGCTAACAGCCATCAAGAAATTGTACAACGAAATGGAAAGACGTATTGAAGATGCAACCAAGTTTGGTGAAGTACCCAAAGAAGCACGTCTGAAGCATAAGGGATTTTCTCAGTGGGATTCATATTCTTCTCGACGTGACCATGACACAATTCTTGAAATACTACTTCATAAAAAGGACCCTGAGAATTCAAAAGATGTAGATGGATTCCTTTTACCAACTCTAGTGTATTTGGCTCGTGAGAAGAGACCCCAATATTTCCACAACTTCAAAGCTGGAGCTATGAATTCACTGTTAAGGGTGTCTTCTAATATTAGTGACGGGAAAATCATTCTAAATGTAGACTGTGACATGTACTCAAACAATTCACAGTCTGTGAGAGATGCTCTCTGCTTTTTCATGGATGAAGAGAAAGGTCACAAAATTGCTTATGTGCAGTTCCCTCAGATTTTTGAGAATGTCACTAAGAATGATTTATATGGGAGTGGTCTGATATCAATATCAGAGGTGGAGTTCCCTGGTGCAGACGGTTGTGGTGGTCCTTTGTATATAGGAAGTGGCTGCTTTCACAGGAGAGAGTCTCTTTGTGGATTGAAATTCAGTGATCAATATAGGAATGACTGGAATATTAAAGAAGATTATCAGTTCAAAAAAGTAAGCCTGAAGGAACTAGAAGAAGAATCAAAGGCTCTTGCAAGTTGCACCTATGAGGAAAACACACTATGGGGAAAAGAGATGGGTTTAAGATATGGGTGTCCAGTAGAGGATGTGATAACAGGATTGTCTATTCAGTGCCAAGGATGGAAATCAGTGTACTACAATCCACTTAGGAAGGCTTTCTTAGGGTTAGCTCCCACTACCTTGCCTCAAACACTTGTTCAACACAAGAGATGGTCTGAAGGAGACTTGCAAATTTTGATTTCTAAATATAGCCCTGCATGGTATGGTTTTGGAAGGATCACTTTGGCCCTTCAAATGGGATACAGTATTTATTGCTTATGGGCACCTAGCTCTTTTGCAACACTATATTATTCTATCATCCCTTCATTGTACCTCCTTAAAGGCATTCCCTTGTTTCCAAAGATCTCAAGTCCATGGTTCATACCTTTTGCATATATCATTGTTGGTGAAGCCACTTATAGTTTGTTGGAGTTTTTCTTCTGTGGGGGGACATTTCAAGGTTGGTGGAATGAACTAAGGATATGGCTATACAAGAGAACAAGCTCTTACCTTTTTGCCTGCATTGACACCATCTTGAAGCTTTTTGGATTCTCAGATTTAACTTTTGTAATCACAACTAAGGTTACTGAAGAAGAAGCTTCCAAACGCCATGAGAAGGAAATAATGGAGTTTGGAACCTCCTCTCCTATGCTCACTGTATTAGCAACTCTTGCATTGCTAAATTTGTTCTGTTTTCTCAGTGTGTTGAAGAATGCAGTTTTAAGGGAAGGTGGCTTTGGAATTTGTGAGACAATGGTCTTGCAACTTCTATTGTGTGGATTTTTGGTTCTAATCAACTTGCCTATATACCAAGCACTTTTCTTAAGGAAGGACAATGGAAGATTGCCTGGTTCTGTTGCCATAAAATCAGTGTTGCTTGCACTATTTGTAGTTACCTTCTTTAGCTTTGCATGA 2187 0.4037 MEDGVAAGELVILGMPWMTREEEERASLISHIKDAKGEHGKWVWLGMFCAELWFGFYWVLTQAFRWNLVFRQPFTNRLSQRYEKKLPGVDIFVCTADPDIEPPKMVINTVLSVMAYDYPTENLNVYLSDDAGSQITFYALLEASNFAKHWIPFSRKFKVEPRSPAAYFKSIVSSGYSADSDQVKELTAIKKLYNEMERRIEDATKFGEVPKEARLKHKGFSQWDSYSSRRDHDTILEILLHKKDPENSKDVDGFLLPTLVYLAREKRPQYFHNFKAGAMNSLLRVSSNISDGKIILNVDCDMYSNNSQSVRDALCFFMDEEKGHKIAYVQFPQIFENVTKNDLYGSGLISISEVEFPGADGCGGPLYIGSGCFHRRESLCGLKFSDQYRNDWNIKEDYQFKKVSLKELEEESKALASCTYEENTLWGKEMGLRYGCPVEDVITGLSIQCQGWKSVYYNPLRKAFLGLAPTTLPQTLVQHKRWSEGDLQILISKYSPAWYGFGRITLALQMGYSIYCLWAPSSFATLYYSIIPSLYLLKGIPLFPKISSPWFIPFAYIIVGEATYSLLEFFFCGGTFQGWWNELRIWLYKRTSSYLFACIDTILKLFGFSDLTFVITTKVTEEEASKRHEKEIMEFGTSSPMLTVLATLALLNLFCFLSVLKNAVLREGGFGICETMVLQLLLCGFLVLINLPIYQALFLRKDNGRLPGSVAIKSVLLALFVVTFFSFA 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00499 728 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 540 IPR029044 -
Vian6g00499 728 Coils Coil 18 38 - -
Vian6g00499 728 Pfam Cellulose synthase 405 722 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian6g00499 728 Pfam Cellulose synthase 89 389 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vian6g00499 728 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 169 IPR029044 -
Vian6g00499 728 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 402 IPR029044 -
Vian6g00499 728 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 35 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00499 Vian-Chr6 20059798 20065456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00499 29 727 Glycosyltransferase AT1G55850 57.407 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00499 - - gmx:100815825 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00499 6 20059798 20065456 Vian6g00499 6 20059798 20065456 ECH
Vian6g00499 6 20059798 20065456 Vian7g01100 7 19214438 19218535 PCT