Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01098 ATGGTGGCCAAAATCAGGCAAAGTTCTGCTAACTCTCCGAGTCCTAAAAAACCAGTTGTTGGGGAGATTGACACCAGTCCACCTTTTCAATCTGTTAAAGATGCAGTTTCTCTATTTGGTGAAGGTGCTGTGTCTAGTGAAAAACCTGTCATTAAGAAGGCAAAACCTTATTTTGCTCAGAGTATTTGGGCAAAGGAGTCACAACTTCACCTAGCCCGGAAAGAGCTGCAAAAATTAAAGGAACAACTAAAGAATGCAGAAACTACGAAGGCTCAAGTCCTGGTGGAGCTTGAAAAGGCTAAGAGAGTGGTTGAGGATCTCTCACAAAAGCTTGAAGCTCTCATCAAATCAAGAGAATCAGCAATACAATCAACAGATGTTTCAAAAACTCGAGCAAAACAGCTTAAAGAAGAAAAGTGTGGTGATCTTGATGGAACCAATGGTTCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGTTATGCCTCTGTCGTTACAGAACTTGATGTTGCAAAGCAAGAACTGAGTAAAATTCGGCAGGGGTATGATTTATCCTCCGAAGCAAGAGTTTCTGCTTTCAAGCAAACAGCAGAAGCGGAAGATGCAATGAAGGCCAACAACAAAAGAGCATCAGAACTATCTAAAGAAATTTTGGCTGTAATGGAATCAATCGATCAAGTTAATACTCAATCTGTCCAAGCACATTTGCTGAAAGAAGAGACACAAGCCAAGCAAAATGTTCTAAGACAATCATATGAAGCTGCCCTTGAAGAATCCAAAAGGAATCTGCTCGATTTAAAGAAGGAATTTAATCCAGGGCTTACCAAAAATCTAGAGTTGCAGCTGACTGAGACAATGAATGAGATAAGCGTTTTGCAAGAACAATTGGAAAATAGAAAGAAATCAGACTTGGATTCTTTGAAGAGTGTCACTCTGGATCTTGATGATGCTAAGGAATCACTGCAGAAAGTAGCAGGACAGGAAGAGTCCCTTAGAGCCATCGTGGAAGCTCTTAGGATGGATCTGGAGAATGTAAAAGGAGAACACACTGCATTGAAAGAGAAAGAATTCAAAACTGTTTCCTTTGTTGAGAATCTGCGGGTAGAGCTCCAGAAAAGTGAGTCTGAACTTGAGGCCTACTTGGCAGAAGAATCTAAAGCTAGAGGTGCATCAGAGGAAATGATCTGGAAATTGAACCAGTTGTTGACTGAAACTGAAAATGCAAGGAGGGAAACACAAGATAGGAAGAATGAGGCTGCACAATTGAAGATGGAAGCTGTAGTCACTAAACTTGTTTTAGAAGATGCCGAAATAAAGCTCAAAGCAGCATTGCAAGAAGTAGAAGTAGCAAAAACAGCTGAGGCAAGTGCTCTTGAACAGATCAGGGTCTTATCTGTGAGGACCAGTGATTCTGGTTCATCAACTTGTGAATCTGGTGCAAGAATTACAATCTCAAGGGAGGAGTTTGAGTCCTTAGTTCATAAGGTTGAGGAGTCTGATAAATTAGCAGATATGAAAGTGGACGCTGCCAAAGCACAGGTGGAAGCTACAAAGGTGAGTGAAAATGAAGTTCTAAAAAGGTTAGAGGAAACTCAAAAGGAAATTGAGGATATGAAGACTGAAACACAGGAAGTCTTGAAAAGGGCTGAGATGGCTGAAGCAGCAAAGAGAGCAGTGGAGAATGAGCTCAGAAAGTGGCGTGAAAGAGAGCAGAAGAAAGTAGCAGAAGCTGCTTCTAAATTATTGGCTGAAACACAGATGGCAGCAGAATTATCTCCTCAGCACTATAGGATTCAAAAGCAGAATTCACTACCAAAGGTGGAGATGAAGAAGTTAGAGAAAGGGAAGGTTTCAGTTTCAAAGAAAGTTCTCTTGCCTAACATGAGTGCCATCTTTCACAGGAAAAATAACCATGTTGGAGGAGGACCTTCTTCTTAG 1938 0.4092 MVAKIRQSSANSPSPKKPVVGEIDTSPPFQSVKDAVSLFGEGAVSSEKPVIKKAKPYFAQSIWAKESQLHLARKELQKLKEQLKNAETTKAQVLVELEKAKRVVEDLSQKLEALIKSRESAIQSTDVSKTRAKQLKEEKCGDLDGTNGSWKEELETAVKSYASVVTELDVAKQELSKIRQGYDLSSEARVSAFKQTAEAEDAMKANNKRASELSKEILAVMESIDQVNTQSVQAHLLKEETQAKQNVLRQSYEAALEESKRNLLDLKKEFNPGLTKNLELQLTETMNEISVLQEQLENRKKSDLDSLKSVTLDLDDAKESLQKVAGQEESLRAIVEALRMDLENVKGEHTALKEKEFKTVSFVENLRVELQKSESELEAYLAEESKARGASEEMIWKLNQLLTETENARRETQDRKNEAAQLKMEAVVTKLVLEDAEIKLKAALQEVEVAKTAEASALEQIRVLSVRTSDSGSSTCESGARITISREEFESLVHKVEESDKLADMKVDAAKAQVEATKVSENEVLKRLEETQKEIEDMKTETQEVLKRAEMAEAAKRAVENELRKWREREQKKVAEAASKLLAETQMAAELSPQHYRIQKQNSLPKVEMKKLEKGKVSVSKKVLLPNMSAIFHRKNNHVGGGPSS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01098 645 Pfam Weak chloroplast movement under blue light 248 572 IPR008545 -
Vian7g01098 645 Pfam Weak chloroplast movement under blue light 22 234 IPR008545 -
Vian7g01098 645 MobiDBLite consensus disorder prediction 1 15 - -
Vian7g01098 645 Coils Coil 398 425 - -
Vian7g01098 645 Coils Coil 363 383 - -
Vian7g01098 645 Coils Coil 335 355 - -
Vian7g01098 645 Coils Coil 511 576 - -
Vian7g01098 645 Coils Coil 433 453 - -
Vian7g01098 645 Coils Coil 275 302 - -
Vian7g01098 645 Coils Coil 196 216 - -
Vian7g01098 645 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 21 620 - -
Vian7g01098 645 Coils Coil 238 269 - -
Vian7g01098 645 Coils Coil 62 124 - -
Vian7g01098 645 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01098 Vian-Chr7 19185382 19187920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01098 - - gmx:100817643 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01098 7 19185382 19187920 Vian7g01098 7 19185382 19187920 ECH
Vian6g00500 6 20108545 20112089 Vian7g01098 7 19185382 19187920 PCT