Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00500 ATGGTAGCGAAAATTCGGCAAAGTGCTACTGAGTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCGGGTGAAAAACCAATTATTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTATTGGCCAAGGAGACACAACTACATGTAGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAGGTAAAGAATGCTGAAACTACCAAGGTTCAAGCTCTTGTGGAGCTTGAAAGGGCGAAAAGAACAGTTGAGGATCTGACACAGAAGATGAAAGTTATTGGTGATTCTAGGGAGTTAGCGATCAAGACAACCGAAGCTGCAAAGAGTCAGGCAAAACAACTTGCAGAAGAAAAGTATGGTATCCCTGACGTAACAGGTGGTGCTTGGAAGGAAGAATTAGATTCTGCAGTAAAAAGGTACGCATCTGTCATGACAGAACTTGATGCAGCAAAGCAAGTATTGAGCAAGACTCGACAAGAGTATGATTCATCCTTGGATGCAAAAAAGTCTGCTTTCAAGCGAGCAGCAGAAGCTGAAGATGGATTGAAGGAAAACACCGAAAGAGCATCTGAGCTTTCTAAAGAAATTTCATCTGTAAAGGAATCAATTGAGCAAGCAAAGCTTGCATCTATTGTGGCACAGCAACAGCAAGCAATGATTTTGGCTGAGAAAGATGTTCTAAGACAATCGTATAAAGCTACCCTGGAACAATCTGAAAAGCAATTGCTTGCTTTAAAGAAGGAATTCAGTCCTGAGCTTTCCAAGAATCTTGAAATGCAGCTGGAGGAGAGAATGAGTGAAATTGGGGCTCTTCAAAAGGAAATGGAAAATAAAAGGATGTCGGACTTGGACTCTGTTAAAAGTGTCACTTTGGAGCTTGATGATGCTAAGGAGTCACTGCAGAAAGTAGCAGATGAAGAAAGCTCTCTTAAAAGCTTAGTGGAATCTCTCAAGGTGGAACTGGAGAATGTAAAGAAAGAACTTTCTGAGTTGAAGGAGAAGGAATCTGAAACTGAATCCATTGTTGGGAATCTGCACGTCAAGCTCCGCAAAAGCAAGTCCGAGCTTGAAGCCTGCATGTCAGAAGAATCTAAAGTTAGAGGTGTATCTGAGGAAATGATCTTGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGGGAAGCAGAAGATATGAAGAAAAAAACAGAAGAATTGAAGAAGGAAGCTGAAGTTACTGGACTTGCATTAGCAGAAGCAGAGAGAAAGCTTAAAGTGGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCCGAGAAAAGAGCTCTTGACCAGATTACAGTGTTAACTGAAAGAACTACTGCTGCTCGTGCATCCACATCTGAATCTGATGCTGTGATTACAATCTCAAAAGATGAGTTTGATTCACTAAGCCATAAAGTTGAGGAGTCTGACAAATTAGCAGACATGAAAGTGGCTGCTGCCATGGCACAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAAGTTAGAGACAACTCAGAAGGAAATTGAGGATATAAAGACTGCAACACAAGAGGCCCTGAAAAAGGCCGAAATGGCTGAAGCAGCAAAAAGGGCAGTGGAGAGTGAGCTCCGAAGATGGCGTGAGAGGGAGCAAAAGAAGGCTGCAGAAGCTGCATCCCGAATTTTGGCTGAGACACAGGTGTCAACAGAATCATCACCTCAGCACTACAGGATTCAAAAGCAGAATCATCCTCATACAACTGCAGAGGTGAGGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAAAAAGCCCTCTTGCCTAATATTAGCGGCATCTTCCATAGGAAGAAAAACCAGGTTGAGGGTGGCTCTCCTTCTTATCTGCCTGGTGAGAACCCTCTATGA 1962 0.4292 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPIIKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKVQALVELERAKRTVEDLTQKMKVIGDSRELAIKTTEAAKSQAKQLAEEKYGIPDVTGGAWKEELDSAVKRYASVMTELDAAKQVLSKTRQEYDSSLDAKKSAFKRAAEAEDGLKENTERASELSKEISSVKESIEQAKLASIVAQQQQAMILAEKDVLRQSYKATLEQSEKQLLALKKEFSPELSKNLEMQLEERMSEIGALQKEMENKRMSDLDSVKSVTLELDDAKESLQKVADEESSLKSLVESLKVELENVKKELSELKEKESETESIVGNLHVKLRKSKSELEACMSEESKVRGVSEEMILTLSQLTSETENARREAEDMKKKTEELKKEAEVTGLALAEAERKLKVALEEAEAAKAAEKRALDQITVLTERTTAARASTSESDAVITISKDEFDSLSHKVEESDKLADMKVAAAMAQVEAVKASENEALKKLETTQKEIEDIKTATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQNHPHTTAEVRKFEKEKVSVSKKALLPNISGIFHRKKNQVEGGSPSYLPGENPL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00500 653 MobiDBLite consensus disorder prediction 405 420 - -
Vian6g00500 653 Coils Coil 274 294 - -
Vian6g00500 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Vian6g00500 653 Coils Coil 397 463 - -
Vian6g00500 653 Coils Coil 61 116 - -
Vian6g00500 653 Coils Coil 248 268 - -
Vian6g00500 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 20 626 - -
Vian6g00500 653 MobiDBLite consensus disorder prediction 583 607 - -
Vian6g00500 653 MobiDBLite consensus disorder prediction 401 420 - -
Vian6g00500 653 MobiDBLite consensus disorder prediction 583 600 - -
Vian6g00500 653 Coils Coil 195 229 - -
Vian6g00500 653 Coils Coil 510 568 - -
Vian6g00500 653 Coils Coil 306 361 - -
Vian6g00500 653 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00500 Vian-Chr6 20108545 20112089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00500 - - gmx:100794569 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00500 6 20108545 20112089 Vian7g01098 7 19185382 19187920 PCT