Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01075 ATGGCTGTTCAAAACTCTCTCCAAATAGCTAGAAGTGGTACTGGTGATTATGACGATGATGGGCGTGCAAAGAGGACTGGAACTACACGGAGTGCTGTGGCTCATATCATCACAGCCACTATTGGTGCTGGTGTTCTGTCTCTGGCATGGAGTACTTCCCAGTTGGGATGGATTGCAGGACCATTTTTCTTGCTTTTTTGCGCATTTGTGACATGTGTTTCTTCATTCCTCCTTTCCGATTGTTACAGAACTGTGGATCCTGTAACTGGCAAAAGAAACTATACTTACATGGATGCTGTTAGAATCTATCTTGGTAATAAAAGGACATGGTTGGCTGGTTTCCTTCAATATTTGAGCTTGTATGGGGTTACTGTTGCTTATGTAATTACCACAGCAACCTGTTTGAGAGCAATACTGAAATCAAATTGTTATCACAAGGAAGGACATCAAGCTCCTTGTAAATATGGGGATACAGAATACATGATGCTGTTTGGACTAGTTCAGATCGTAATGTCATTCATACCAGACCTTCATAACATGGCATGGGTTTCAGTTGTTGCTGCCATAATGTCCTTTGCATATTCATCTATTGGACTTGGACTTGGAGTCAAGACAGTAATAGAAAATGGAAGAATTATGGGTAGTTTAACAGGAGTACCAGCTGCAAATATTTCTGACAAGCTATGGTTAGTCTTCCAAGCAATTGGTGATGTTGCCTTTGCTTATCCATACTCAGTCATCCTCCTTGAGATAGAGGACACTCTTGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATGATTGCTATCCTCATTACAACATTCTTCTATCTCTGTTGTGGATGCTTTGGATATGCAGCTTTTGGAAATCAAACACCAGGGAACCTCTTGACAGGGTTTGGGTTTTATGAGCCTTATTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCACTTGGTGGGAGGATATCAGATTTTCTGTCAGCCGATATATGGTGCTGTTGACAGATGGTGTTCAAAAAGATACCCTAACAGTGGCTTTGTGAATAATTTCTACCAAATGAAGCTGCCTTGGTTGCCAGCTTTTCGGATAAACTTGTTCAGGATATGTTTTAGAACAGCCTATGTGATTTCCACTACTGGACTTGCGATCCTATTTCCTTACTTTAATCAAGTTCTGGGAGTGTTAGGAGCATTAGGCTTTTGGCCATTGGCTATATATTTCCCAGTAGAGATGTATTTTGTGCAGAGGAAAATTGAAGCTTGGTCTAGAAAATGGATTGTCTTAAGAACCTTCAGCTTTATTTGCTTTCTTGTGTCACTGCTAGGTCTCATTGGATCACTTGAAGGAATCATAAGCGAGAAACTAAGCTAA 1386 0.4084 MAVQNSLQIARSGTGDYDDDGRAKRTGTTRSAVAHIITATIGAGVLSLAWSTSQLGWIAGPFFLLFCAFVTCVSSFLLSDCYRTVDPVTGKRNYTYMDAVRIYLGNKRTWLAGFLQYLSLYGVTVAYVITTATCLRAILKSNCYHKEGHQAPCKYGDTEYMMLFGLVQIVMSFIPDLHNMAWVSVVAAIMSFAYSSIGLGLGVKTVIENGRIMGSLTGVPAANISDKLWLVFQAIGDVAFAYPYSVILLEIEDTLESPPPENKTMKKASMIAILITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIFCQPIYGAVDRWCSKRYPNSGFVNNFYQMKLPWLPAFRINLFRICFRTAYVISTTGLAILFPYFNQVLGVLGALGFWPLAIYFPVEMYFVQRKIEAWSRKWIVLRTFSFICFLVSLLGLIGSLEGIISEKLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01075 461 PANTHER OS05G0424000 PROTEIN-RELATED 31 455 - -
Vian7g01075 461 MobiDBLite consensus disorder prediction 1 23 - -
Vian7g01075 461 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01075 Vian-Chr7 18963274 18965756 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01075 17 456 Organic Solute Cotransporters AT5G09220 52.596 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01075 K24917 - gmx:100786621 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01075 7 18963274 18965756 Vian7g01075 7 18963274 18965756 ECH
Vian6g00541 6 20827045 20829899 Vian7g01075 7 18963274 18965756 PCT