Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00607 ATGGCTCTCATCACTCGAACCGGAACCACGTGCCGCCTCCCTCAGCGGCTAGCTTCGGCGTCCCTCCTCCACAGCAGTTCAGGAACGGTGGCTCCGACGAGTTATTGTGCGCCGTCTCCGCCGGCGAAGTCCTCCCCCGTGCGATTGTCGAAGCCGGCGGAGTTCGTAATCTCGAAGGTCGACGCGCTCATGAACTGGGCCCGCGTGGGGTCCATCTGGCCCATGACGTTTGGGCTGGCCTGTTGCGCGGTGGAGATGATGCACACGGGCGCGGCCCGTTACGATCTGGACCGCTTCGGAATCATCTTCAGGCCCAGCCCACGCCAGTCCGATTGCATGATCGTTGCCGGCACCCTCACCAACAAGATGGCCCCTGCTCTTCGCAAGGTTTATGATCAAATGCCAGAACCAAGGTGGGTGATATCAATGGGAAGCTGTGCCAATGGAGGAGGATATTACCACTATTCATACTCAGTTGTGAGAGGATGTGACAGGATTGTTCCTGTTGACATATATATCCCAGGTTGTCCTCCAACTGCAGAGGCTTTACTCTATGGTCTCCTCCAGCTCCAGAAGAAGATCAATAGGCGCAAGGACTTCCTCTGGTGGTGGACAAAGTGA 621 0.57 MALITRTGTTCRLPQRLASASLLHSSSGTVAPTSYCAPSPPAKSSPVRLSKPAEFVISKVDALMNWARVGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGLLQLQKKINRRKDFLWWWTK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00607 206 NCBIfam NADH-quinone oxidoreductase subunit B 55 196 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vian7g00607 206 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 52 195 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vian7g00607 206 FunFam NADH-quinone oxidoreductase subunit B 2 47 206 - -
Vian7g00607 206 PANTHER NADH DEHYDROGENASE 50 205 - -
Vian7g00607 206 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 81 190 IPR006137 GO:0051536
Vian7g00607 206 SUPERFAMILY HydA/Nqo6-like 54 203 - -
Vian7g00607 206 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 162 178 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vian7g00607 206 Gene3D - 43 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00607 Vian-Chr7 13970782 13971540 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00607 K03940 - gmx:100814025 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00607 7 13970782 13971540 Vian7g00607 7 13970782 13971540 ECH
Vian7g00607 7 13970782 13971540 Vian4g02139 4 38230569 38233236 PCT