Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00573 ATGGAGCAAGGTTTCCCCAAAAACATGTTCAAGAAGCTCTGTGTCTTCTGCGGCAGCAACTCCGGTAATCGCCAAGTTTTCAGTGACGCCACCATTGAACTGGCCAATGAACTGGTTAAGAAGAACATTGACTTGGTGTATGGTGGGGGAAGTGTTGGGCTAATGGGCTTAATATCCCAGAGAATGTATGATGGAGGCTGCCATGTTCTTGGGGTTATTCCAAAAGCTCTCATGCCCCTTGAGATATCCGGTAAACCAGTTGGTGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATCGCTCTACCTGGAGGATATGGAACAATGGAAGAGCTGTTGGAGATGATAACTTGGGCTCAACTTGGAATTCATAAAAAGCCTGTTGGTCTACTGAATGTTGATGGTTACTACGACTCGTTGCTTGCATTGTTTGACAACGGTGTTAAAGAAGGCTTCATTAAGCGTGGTGCTCGGGATATTCTCGTTGCGGCTTCATCAGCCAAAGAACTTATGATGAAATTGGAGCAATATTCTCCTTCCCATGAACATGTAGCCCCTCATGAGAGCTGGAAGACAAGGCAATTGGGTAATTATGCAGGACTGGAGAATACAGAATGA 651 0.4485 MEQGFPKNMFKKLCVFCGSNSGNRQVFSDATIELANELVKKNIDLVYGGGSVGLMGLISQRMYDGGCHVLGVIPKALMPLEISGKPVGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYDSLLALFDNGVKEGFIKRGARDILVAASSAKELMMKLEQYSPSHEHVAPHESWKTRQLGNYAGLENTE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00573 216 NCBIfam Rossman fold protein, TIGR00730 family 12 188 IPR005269 GO:0009691|GO:0016787
Vian7g00573 216 SUPERFAMILY MCP/YpsA-like 8 188 - -
Vian7g00573 216 Pfam Possible lysine decarboxylase 55 184 IPR031100 -
Vian7g00573 216 Gene3D - 10 204 - -
Vian7g00573 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 208 - -
Vian7g00573 216 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00573 Vian-Chr7 13518488 13521109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00573 K22522 - gmx:100819765 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00573 7 13518488 13521109 Vian4g02123 4 38068471 38070622 PCT