Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02123 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGCAGCAACTCTGGCAACCGGCAAATCTTCAGCGACGCTGCGATTCAATTGGGCAATGAACTGGTAAAGAGGAACTTAGACTTGGTGTATGGTGGTGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTCTATGATGGAGGCTGCCATGTCCTGGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCTGGTGAAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATACGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTGGTGCACGGAATATTGTTGTCTCTGCTACTTCTGCTAAAGAACTTATGATGAAGATGGAGCATTACAGTCCTTCGCACGAACATGTTGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTGATTATCCAGATGCTGAATGA 642 0.4564 MEEGYPRSKFKTVCVFCGSNSGNRQIFSDAAIQLGNELVKRNLDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSATSAKELMMKMEHYSPSHEHVAPHESWQMKQLGDYPDAE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02123 213 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Vian4g02123 213 SUPERFAMILY MCP/YpsA-like 9 188 - -
Vian4g02123 213 Gene3D - 9 204 - -
Vian4g02123 213 NCBIfam Rossman fold protein, TIGR00730 family 11 188 IPR005269 GO:0009691|GO:0016787
Vian4g02123 213 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Vian4g02123 213 PANTHER LOG FAMILY PROTEIN YJL055W 7 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02123 Vian-Chr4 38068471 38070622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02123 K22522 - gmx:100785484 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00573 7 13518488 13521109 Vian4g02123 4 38068471 38070622 PCT