Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00523 ATGGCGTTTTGGAGGTCCTTGGCGTTCTCCGCGATTCTTCTTCCACTCTTCATCCATGGCGCACTCTGCTTCTACCTCCCTGGCGTTGCTCCACAGGACTTCCAGAAGGGAGATCCATTGCAAGTAAAAGTAAACAAATTAACTTCAACGAAGACTCAGCTTCCATATACATACTATTCTCTTCCGTACTGTGCACCAGAGAAAATATTGGATAGCGCTGAAAATCTTGGAGAAGTGCTTCGTGGTGATCGCATTGAAAATTCTCGATATGTGTTTAAGATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTTAAGCTTGATGCCAAAACTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTATCGAGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAACGGGTGGAACCGGACTCTACTGTTTATCAACTTGGTTTCCATGTTGGACTCAAAGGGCAGTATACTGGGAGCAAGGAAGAGAAGCATTTTATTCACAACCATTTGGCTTTTACGGTCAAGTATCATAGAGATACACTTACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCTTTCAGTGTTAAACACGAATTTGAAGGGAAGTGGGATGAACAGGCCACCCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTGAATTCGAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACCTATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTTAATTCATTGATGATTGTTCTCTTTCTCTCGGGCATGGTAGCAATGATAATGCTTCGTACACTTTACCGTGATATTTCAAAGTACAATGAATTAGAAACCCAAGAAGAAGCACAGGAAGAGACTGGTTGGAAGCTTGTCCACGGTGATGTTTTTAGGCCACCAAACAACCCAGATTTGCTATGTGTTTATGTTGGGACGGGTGTTCAGTTTTTTGGAATGATACTAGTAACAATGATGTTTGCTGTCCTGGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTAATGACGGTCATGCTCTTGCTTTGGGTTTTCATGGGAATTTTCGCTGGTTATGCCTCGGCTCGCTTATATAAAATGTTCAAAGGAGCAGAGTGGAAGAAAATTGCCCTCAAAACTGCAATCATGTTCCCTGGAATCGTTTCTGCCATTTTCTTTGTATTAAATGGTCTGATATGGGGACAAAAATCGTCTGGAGCAGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATCTCGGTTCCACTTGTTTTTGTTGGTGCCTATGTTGGGTTTAAGAAGCCTGCGACTGAAAGTCCTGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCATGGTACATGAATCCAGTCTTCTCAATTCTGATCGGAGGAATACTTCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACTTCAATATGGTTGAATCAGTTCTACTACATCTTCGGCTTCCTCTTCTTGGTCTTTACCATCCTCATTGTCACTTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCTTACCTTACATCTGGCTCATCTGCTCTTTATCTATTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGGGTTATTGTACTTCGGTTACATGCTTATAGCTTCCTATGCCTTCTTTGTTGTAACTGGATCCATCGGATTTTACGCATGCTTTTGGTTCACAAGGCTCATCTATTCCTCGGTCAAGATTGATTAG 1914 0.4237 MAFWRSLAFSAILLPLFIHGALCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYTYYSLPYCAPEKILDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRVEPDSTVYQLGFHVGLKGQYTGSKEEKHFIHNHLAFTVKYHRDTLTESARIVGFEVKPFSVKHEFEGKWDEQATRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNPDLLCVYVGTGVQFFGMILVTMMFAVLGFLSPSNRGGLMTVMLLLWVFMGIFAGYASARLYKMFKGAEWKKIALKTAIMFPGIVSAIFFVLNGLIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKKPATESPVKTNKIPRQIPEQAWYMNPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFTILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGSIGFYACFWFTRLIYSSVKID 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00523 637 Pfam Endomembrane protein 70 55 593 IPR004240 GO:0016020
Vian7g00523 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 637 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00523 Vian-Chr7 12809794 12813313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00523 11 637 Miscellaneous Gene Families AT5G10840 84.897 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00523 K17086 - gmx:100810506 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00523 7 12809794 12813313 Vian7g00523 7 12809794 12813313 ECH
Vian7g00523 7 12809794 12813313 Vian4g02047 4 37294002 37297685 PCT